Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0770 ATGAAAATACTAAAAGGTGGTTTTACTAATCAAGAATCATTGAAGCTAAGAAATCAAGAATTTTCTTACTCCAACGTTCTTGAGATCACCAATAACTTTGAAAACTTGATTGGAGAAGGAGGATTTGGGAAGGTTTATTTTGGAAATCTTAATAATGATACTAAAGTTGCTGTAAAGTTACTTTCTCAATCCTCATCACAAGAGAGTGGTACCAGAGCTTTGGTTTTTGAGTATATGGCAAATGGCGACCTCCGTCAATACTTATCAGGACTAGATTATTTACATAATGGCTGTAAGCCAGCTATAGTGCATAGAGATCTAAAGACAACTAACATTTTGCTAGACGAAAATATGGAAGCTAAGATTGCCGATTTTCCTGCTGGAACAGTTGGTTACCTTGATCCTGAGCCTGACATAAGTCAAGTGGTAGCTGAACTAAGGGAATGTTTGGCAATGGAGACAAGCATTGAAAGGACCAACTACAACCCTAATCCAGACATCCCTACCCTATCTGCTAGATAG 522 0.3774 MKILKGGFTNQESLKLRNQEFSYSNVLEITNNFENLIGEGGFGKVYFGNLNNDTKVAVKLLSQSSSQESGTRALVFEYMANGDLRQYLSGLDYLHNGCKPAIVHRDLKTTNILLDENMEAKIADFPAGTVGYLDPEPDISQVVAELRECLAMETSIERTNYNPNPDIPTLSAR 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0770 173 Gene3D Phosphorylase Kinase; domain 1 7 82 - -
Lele43g0770 173 PANTHER OS07G0107800 PROTEIN-RELATED 16 145 - -
Lele43g0770 173 Gene3D Transferase(Phosphotransferase) domain 1 83 138 - -
Lele43g0770 173 Pfam Protein kinase domain 85 136 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele43g0770 173 ProSiteProfiles Protein kinase domain profile. 1 173 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele43g0770 173 ProSitePatterns Serine/Threonine protein kinases active-site signature. 102 114 IPR008271 GO:0004672|GO:0006468
Lele43g0770 173 SUPERFAMILY Protein kinase-like (PK-like) 15 136 IPR011009 -
Lele43g0770 173 ProSitePatterns Protein kinases ATP-binding region signature. 37 59 IPR017441 GO:0005524
Lele43g0770 173 SMART serkin_6 31 172 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0770 Lele-ChrLele43 7228099 7230612 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0770 14 164 Receptor kinase-like Gene Family AT3G46330 37.991 3.06e-39 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Lele43g0770 Pkinase 8.6e-11 CL0016