Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0766 ATGTATCCATTAGGCATCATACCTTGCTACAATTCCCATTTGCCTCATATTCAGTTGGGTATTGGTTGGCCCTGGCCTGTTCTCGCTTTTGCTTTTGGCCTTCTTTGTCCCACTATTCGAACCAACTTCCCACCAGTCTTCATTAGATTCCCACGGAACAGGCTAATCTCTTCCAATTGGCCTTGTTCTAAGCTTAACTTGCTTTCACTCCGTTTTCAGTCAAAAAATTTGATTAATGTTGCAGTTTTTTGTACCGAATCTCCGAAGATGGAAGTACTAAAACAAAAGAATCAAGCTTATCCATATTCTGACGTTCTTCAAATTACCAACAATTTTGAAACTGTTATTGGAGAAGGAGGGTTTGGAAAAGTTTACCTCGGCATTTTGAGAGATGAGACACAGGTTGCCGTGAAGTTACTTTCTTCATCCTCAAGGCAAGGATATAAGGAGTTTCAATCAGAGGCTGAACTCTTAACAACCATTCATCACAAAAACTTGGTTTCCCTTGTTGGGTTTTGTGATGATAATGGCGTCAAAGCATTGATTTATGAATATATGGATCTTGGAGACCTCAGCCAACTATTGTCAGGATTGAGATATCTCCATGATGGTTGTGAGACTCCTATAATTCACAGGGACTTGAAGCCTTCCAACGTTTTATTAAATAAATTCATGGTTGCCAAGATTGCTGATTTTGGATTGTCTAGAGCATTTAAAAATGAGAGAGATTCTCATATAGAACCAGCTGGTACACCTGGTTACGTTGATCCAGAATTTCAAAGGACAGGAAACTTGAATAAAACAAGTGACATTTATAGCTTTGGGATGATTCTTATTCATCTAATCACTAGCCGTCCTCCGATAGTAAGAAGAGAACTTGATAATGTTTGTTTTATTGTTGACTGGATTCAACCGAAAATTGATTGTGGGGATATCCAAGGCATTGTTGATCCAAGGTTGACTGGTCAATTTCTTGTTGCTTCTGCATGGAAAGCTGTTGAGATAGCAATGTCATGCATATCACCAGAGTCAACTCAAAGGCCAAACATAAGCTGCGTGTTGCATCAACTAAAACAATGTTTAGCAAAGGAGATGGATCATTGCAAATCAAATTATACTGGGCAGTTTGAACCAATCACTATACTCTCAGCTAGGTAG 1158 0.3895 MYPLGIIPCYNSHLPHIQLGIGWPWPVLAFAFGLLCPTIRTNFPPVFIRFPRNRLISSNWPCSKLNLLSLRFQSKNLINVAVFCTESPKMEVLKQKNQAYPYSDVLQITNNFETVIGEGGFGKVYLGILRDETQVAVKLLSSSSRQGYKEFQSEAELLTTIHHKNLVSLVGFCDDNGVKALIYEYMDLGDLSQLLSGLRYLHDGCETPIIHRDLKPSNVLLNKFMVAKIADFGLSRAFKNERDSHIEPAGTPGYVDPEFQRTGNLNKTSDIYSFGMILIHLITSRPPIVRRELDNVCFIVDWIQPKIDCGDIQGIVDPRLTGQFLVASAWKAVEIAMSCISPESTQRPNISCVLHQLKQCLAKEMDHCKSNYTGQFEPITILSAR 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0766 385 Gene3D Transferase(Phosphotransferase) domain 1 188 377 - -
Lele43g0766 385 ProSiteProfiles Protein kinase domain profile. 110 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele43g0766 385 SMART serkin_6 110 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele43g0766 385 ProSitePatterns Serine/Threonine protein kinases active-site signature. 209 221 IPR008271 GO:0004672|GO:0006468
Lele43g0766 385 Gene3D Phosphorylase Kinase; domain 1 91 185 - -
Lele43g0766 385 ProSitePatterns Protein kinases ATP-binding region signature. 116 138 IPR017441 GO:0005524
Lele43g0766 385 Pfam Protein kinase domain 192 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele43g0766 385 PANTHER OS07G0107800 PROTEIN-RELATED 80 361 - -
Lele43g0766 385 SUPERFAMILY Protein kinase-like (PK-like) 92 357 IPR011009 -
Lele43g0766 385 FunFam Leucine-rich repeat receptor-like protein kinase 88 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0766 Lele-ChrLele43 7110380 7115404 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0766 96 366 Receptor kinase-like Gene Family AT1G51890 46.959 8.86e-89 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lele43g0766 Pkinase 3.2e-24 CL0016