LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele43g0763	ATGACTTACGGTGTCTTTTCTACAAAGGAACAATCATCAGAACTAAGAAATCGTGCTTTTTCTTATTCCGATGTCCTTGAGATCACAAATAACTTACAAAACTTGATTGGAGAAGGTGGATTTGGAAAAGTTTACTTAGGCATCCTTAAGAATTGCACTCAAGTTGCAGTGAAGTTACTTTCTGAATCATCAATGCAAGGTCATAGAGAATTTCGATCAGAGGTGAAATTCAAATCCAATAGATTGGATTACTTGCATAATGGTTGTAAGCCTGCAATCGTGCACAGAGACCTTAAGGCCTCCAACATTTTGCTGGACAATAATATGGAAGCTAAGATTGCAGATTTTGGATTGTCTAGAGCTTTTGCAAATGATATTGATAGTCACGTCTCCACTCGTCCTGCTGGGACATTTGGTTACCTTGATCCTGAATTTCAAAGTTCCGGAAACCTGACAAAAGGGAGCGATATTTATAGTTTTGGAGTAATTATGCTAGAACTAGTGACCGGAAAACCAGCAGCAAAAAGACAACCCGACAATTCTTTAAGTCTTTTACTTCACTGGGTTTTACCAAAACTTCAAAGCAAGGATATGCAATCCATTGTTGATCCAAGGTTAAAAGGACAATACAATGTTGATTCTGCTTGGAAATTTCTGGAGATAGCCATGTCATGCACCGCACCACTTGCAATTCAGAGGCCTGATATAATTCAAGTGGTAGTTGAACTAAGGGAATGTTTGGCAATGGAGATAAGGATGGAAGGGACCACTCACAAAACCAATTCAAGCAGTTCCTTGGATATGGGTAATTCGCAATTTGATTCAACCTTTAGTGCTCCATCTGCTAGATAG	852	0.3897	MTYGVFSTKEQSSELRNRAFSYSDVLEITNNLQNLIGEGGFGKVYLGILKNCTQVAVKLLSESSMQGHREFRSEVKFKSNRLDYLHNGCKPAIVHRDLKASNILLDNNMEAKIADFGLSRAFANDIDSHVSTRPAGTFGYLDPEFQSSGNLTKGSDIYSFGVIMLELVTGKPAAKRQPDNSLSLLLHWVLPKLQSKDMQSIVDPRLKGQYNVDSAWKFLEIAMSCTAPLAIQRPDIIQVVVELRECLAMEIRMEGTTHKTNSSSSLDMGNSQFDSTFSAPSAR	283

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele43g0763	283	ProSitePatterns	Protein kinases ATP-binding region signature.	36	58	IPR017441	GO:0005524
	Lele43g0763	283	ProSiteProfiles	Protein kinase domain profile.	1	247	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele43g0763	283	Pfam	Protein kinase domain	82	181	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele43g0763	283	Gene3D	Transferase(Phosphotransferase) domain 1	83	268	-	-
	Lele43g0763	283	Pfam	Protein tyrosine and serine/threonine kinase	32	77	IPR001245	GO:0004672\|GO:0006468
	Lele43g0763	283	SMART	serkin_6	30	247	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele43g0763	283	Gene3D	Phosphorylase Kinase; domain 1	12	82	-	-
	Lele43g0763	283	MobiDBLite	consensus disorder prediction	258	283	-	-
	Lele43g0763	283	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	93	105	IPR008271	GO:0004672\|GO:0006468
	Lele43g0763	283	PANTHER	OS07G0107800 PROTEIN-RELATED	15	77	-	-
	Lele43g0763	283	SUPERFAMILY	Protein kinase-like (PK-like)	15	242	IPR011009	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele43g0763	Lele-ChrLele43	7087751	7089982	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele43g0763	7	283	Receptor kinase-like Gene Family	AT1G07560	38.253	5.06e-66	219

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-I-1	Lele43g0763		Pkinase	2.8e-23	CL0016