Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0754 ATGATATCAGCAGGAGGGCCTACTTTGTATGAATCAGGGAAAGGCTGTGGAGCTTGTTATGAGTGTCGTGGTTCTGAGTATTCAGGTCAGGCTCAGAAACTACGCGATGCTGGCATGTTGCAGATTCAACACAGAAGAGTGATATGCAACTATCGTGGCACCTCATTAGCGTTCCACGTGGACTCAGGCTCGAACGAGAACTACTTCGCATGTTTGATAGAGTACGAGGACGGTGACGGAGATATGGCCATGGTGGAACTGAAGGAGGCTCTGGATTCTGCCACGTGGACTCCGATGCAACAGTCGTGGGGCGCCGTCTGGAAGATCAACACCGGAGCGCCGCTGAAAGCCCCCTTCTCCCTCCGCCTCACCTCCGTCGAGTTGGGCCGCACTCTGGTCGCTAATAATATCATCCCCGCTGGTTGGACCCCCGGCCAGACTTACCAATCACCGGTCAATTTTCAGACCTAG 471 0.5393 MISAGGPTLYESGKGCGACYECRGSEYSGQAQKLRDAGMLQIQHRRVICNYRGTSLAFHVDSGSNENYFACLIEYEDGDGDMAMVELKEALDSATWTPMQQSWGAVWKINTGAPLKAPFSLRLTSVELGRTLVANNIIPAGWTPGQTYQSPVNFQT 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0754 156 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 1 23 IPR007112 -
Lele43g0754 156 Gene3D - 51 155 IPR036749 -
Lele43g0754 156 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 67 150 IPR007117 -
Lele43g0754 156 SUPERFAMILY Barwin-like endoglucanases 1 74 IPR036908 -
Lele43g0754 156 PANTHER EXPANSIN-B3 1 24 - -
Lele43g0754 156 SUPERFAMILY PHL pollen allergen 55 150 IPR036749 -
Lele43g0754 156 Pfam Expansin C-terminal domain 57 139 IPR007117 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0754 Lele-ChrLele43 6918996 6920212 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0754 1 154 Expansin Gene Family AT1G65680 46.875 5.53e-58 180