Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0744 ATGGCCGCCGCTGTCCACCTCCTCCTGATCCTCCTCTCAGCCTCCGCCGTCTTCTGTCGCCGTGAAATGGAGCTGCTTCATATGGCTCACACCCAAGTCCTTGAAGCTAGGACTTGGGTTGAGACTCGTCGTCAGAGTGCCGGCAGCGTTGCAAGCTCGATGCTTTCCACGTCGTCGTCGTCATTGTTATCATCGGTGGCGGTGAGGGTGGAGCTAGGAGACTGTGCTAAGCTGTATGAAGAGAGTGAGCAGAGGCTGAATCAGTTGGTATCAAATCCTAGTTATGAGAGGGAAGAAGAAGATGAAGTAACGTGGGTGAGTGGTGTAATGAGTAACCATAGGACGTGTTTGGATGGGTTGGAAGAGAAAGGGTACGTGGAAGCTCAGGGTCAGGGATTGCATAGAAACTTGACTTTATTGCTTGAGGAGGCTCTTCACTTATATGCTAAGAACAAACACAGACCAAAACCAAAACCAAGAAGAGCCCCACGAAAGGGAAACATATCGAAATCGTACGGTGGACTATTGGCGTCATGGAATCCAACAGAGTCAAAGGCACATTTCACGGTGGCTCAGGATGGTTCCGGCAGCCACAGAACCATCGGAGCCGCCATAGAAGCAGTGAACTCAGTGGGTCACAATCGTCCCGAAAGAGTAATCATCCACGTCAAATCCGGAGTCTACAACGAGAAGGTCGAGATCGGATACAAGCTCAAGAACTTGATGCTCGTCGGAGACGGCATTGACAAGACCATCATCACCGGCGCCAGAAGTGTCGGCCGCGGTTCCTCCACCGTCAGCTCCGCCACATTCGATGTATCAGGAGATGGATTCTGGGGAAGAGACTTGGCAATCGAGAACAGAGCAGGACCACAGGATCACCAAGCGGTGGCGATGAAGGTGAGCTCAGACCTCTCCGTCTTCTACAGATGCAGCTTCAGAGGCTACCAAGACACACTTTACGTCCACTCCAATCGTCAGTTCTACAGAGACTCCATAATTTCCGGCACTATCGACTTCATATTCGGCGACGCCTCCGCCGTTTTCCAGAACTGCGAAATCCTCCTCCGGCAGCCAATGTCTCACCAATCCACCTTCATCACAGCACAGGGACGCTCCGACCCGAACCAACCGACCGGAATAGTGATCCAAAACTGTAAAATTAGGCCGGCATCAGGCTCCGCCAGAGTAAAAAACTACCTGGGAAGGCCATGGAAGAAATATTCGAGGACGGTGTTCATGAAGAATGATCTTGATGGTTGTATTGATCCAAAAGGGTGGAGTGAATGGAGTGGTGGTTTTGCATTATCTACTTTATATTATGCAGAGTATATGAACAATGGTGCTGGTTCTTCTACTGAGAATAGAGTGAAATGGCCTGGATTTCATGTTCTGCGTTCTACTTCTGAGGTTAGGCCTTTCTCTGTCGACGAGTTTCTGAGTGGAGGTCGGTGGATTCCTTCCACCGGTGTGCCCTTCTCCGCCGGAGTTTGA 1494 0.5074 MAAAVHLLLILLSASAVFCRREMELLHMAHTQVLEARTWVETRRQSAGSVASSMLSTSSSSLLSSVAVRVELGDCAKLYEESEQRLNQLVSNPSYEREEEDEVTWVSGVMSNHRTCLDGLEEKGYVEAQGQGLHRNLTLLLEEALHLYAKNKHRPKPKPRRAPRKGNISKSYGGLLASWNPTESKAHFTVAQDGSGSHRTIGAAIEAVNSVGHNRPERVIIHVKSGVYNEKVEIGYKLKNLMLVGDGIDKTIITGARSVGRGSSTVSSATFDVSGDGFWGRDLAIENRAGPQDHQAVAMKVSSDLSVFYRCSFRGYQDTLYVHSNRQFYRDSIISGTIDFIFGDASAVFQNCEILLRQPMSHQSTFITAQGRSDPNQPTGIVIQNCKIRPASGSARVKNYLGRPWKKYSRTVFMKNDLDGCIDPKGWSEWSGGFALSTLYYAEYMNNGAGSSTENRVKWPGFHVLRSTSEVRPFSVDEFLSGGRWIPSTGVPFSAGV 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0744 497 MobiDBLite consensus disorder prediction 151 165 - -
Lele43g0744 497 Gene3D Invertase/pectin methylesterase inhibitor family protein 36 150 IPR035513 -
Lele43g0744 497 Pfam Pectinesterase 188 482 IPR000070 GO:0030599|GO:0042545
Lele43g0744 497 Pfam Plant invertase/pectin methylesterase inhibitor 46 127 IPR006501 GO:0004857
Lele43g0744 497 Gene3D - 181 497 IPR012334 -
Lele43g0744 497 CDD PMEI-like_4 74 151 - -
Lele43g0744 497 FunFam Pectinesterase 181 497 - -
Lele43g0744 497 PANTHER PECTINESTERASE 56 487 - -
Lele43g0744 497 SUPERFAMILY Pectin lyase-like 184 496 IPR011050 -
Lele43g0744 497 MobiDBLite consensus disorder prediction 150 170 - -
Lele43g0744 497 ProSitePatterns Pectinesterase signature 2. 334 343 IPR033131 -
Lele43g0744 497 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 56 147 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0744 Lele-ChrLele43 6793254 6797038 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0744 8 497 Carbohydrate Esterase AT3G60730 52.481 0.0 531