Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0739 ATGGAAGAGGGGAGAGGAAGAGTGTGTGATACAGGTGGCAATGGCTTTATTGGTTCTTGGATCATTAAGAGACTTCTTGAGGATGGTTACTCTGTTAATGCCACCATTAGATCTCACCCTGATTTGAGCTTCCTCACAAATCTACCAGGGGCATCTCAGAAGCTCCAAATATTTAAGAATGCAGACCTAAACAAACCAGAAAGTTTCAAGGAAGCCATTGAAGAAGGGTGCATGGGAGTGTTCCATGTGGCTACACCACTGGATCTTGATGACCCCGAGGAGGTATTAACCAAAAGATCCATTGATGGAGCACTGGGAATTTTAAAGGCATGCATAGCTTCAAAAGCTGTGAACAGAGTTGTTTACACATCAAGTGGTACATTGACAGAGAAAGCAATGCTTGAAGTTGGAGAAGACAATGGATTAGATGTTGTTACTTTGCTTCCCACTCATGTTGTTGGACCTTTCATTTGTCCTAAGCTTCATGGCCCTTACCGTACTTCTCTTGATTTGGCATTTGGGACTTATCTACAAACACCAGCAGTGCATGTGGATGAGTTAGCAAGAGCACAAATATTTCTGCTGGAGCATCCAAATCCAAAAGGAAGGTATATTTGTTCAGCATGTTTGAGGCTTCTTCAAGATGGTTACTCTGTTAATGCCACCATTAGACCTCACCCTGAGCACAAGAAAGATGTTAACTTCCTCACAAATCTACCAGGAGCATCTCAAAAGCTACAAATTCTAAAAGCAGACCTTAACAGTCCAGAAAGTTTCAAGGATGCATTGGAGTGTTCCACGTGGCAAGCCCAATGGATTTTTAGCAAGAATGGACCTGAACACCTAGTAACTAAAAGATCTATTGATGGAGCGTTGCGAATTCTGGAAGCATGCCTCACTTCAAAAACTGTGAATAGAGATGAGAGTGCATGGAGTGATGTAGATTATCTTAGAAGTTCAAAGACATTTGGATTGTGGTCTTATGCAATTTCTAAGACACTCAGAGAGAAAGCGGTTCTTGAATTTGGAGAAGAAAATGGATTAGATGTGGTCACTTTGGTTCCAACTTTTGTTGTTGGAACCTTCATTTGTCCAAACCTTCCTGGCCCTATTCTTTCTTCACTCTACTTCGCATTTGGTGACAAGGAACCAATTGGTTATCTGCAAACACCAATGGTACATGTGGATGATGTGGCAACTGCACAAATATTTTTGCTTGAACATCCCAATCCAAAAGGCAGATATATTTGTTCAGCATGCTTTGCAACTCTTGAGAAGGTGTTTCAAGTTATTTTTGTTAAATATCCTGAATTTCAATCACCAAGCATAGATTCCTTGAGAGAAAGGAAAGAGCTCAAATTTCCAGATCTGCCATCAAAGAAGCTCATGGGTGCTGGATTTGAGTCCAAGTTTGGACTTGAGGAACTGTTGATGGATGCTATGGCATGCTGCAAAGAAAAGGCTTCGTCTTCTTCGTGCTGTAACACTCGAGCCCGTCTTCTTCTCTTAATGGAAGAGAGCAAAGGAAGAGTTTGTGTTACTGGTGGCACTGGCTTTGTTGGCTCCTGGATCATTAAGAGACTTCTTGAAGGTGAACAAAGGAAAGATGTGAGCTTCCTCACAAATTTGCCAGGAGCATCTCAAAGGCTGCGTCTTCTGAATGCAGACCTAAGTGACCCGGATAGTTTCAAGGAAGCCATTGAAGGGTGCATTGGAGTATTCCATGTGGCCACCATAATAGATTTTGAGGGAAAGGAACCTGAGGAGATTCTAACCAAAAGATCCATTGATGTTGCATTGGGTATTTTGAGGGCATGCCTCACTTTAAAAACTGTAAAGATAGTTGTTTACACTTCTAGAGCTATAGCTGTTTCTTATTATGGCAAAGAAGATAAAACATTGACAGAGAAGGCAGTACTCGAATTTGGAGAACAAAATGGATTAGATGCTGTGACTGTGATTCCCCCTTTAATTGTTGGACCCTTCATTTGCAAAAGGCTTCCTGTCTCAGTTCATCCTTGTCTTTATTTCATATTTGATAAAAAGGACCCATCAGGTTACCTGCAAATCAATGTGGTGCATGTGGATGACCTGGCAAGAGCACATATATTTCTGCTTGAACATCCCAATCCAAAAGGGAGATATAATTGTTCTACATATGCTGGATTTGAGTACAAGTACGGACTTGAGGAAATGTTGGAGGATACTATTGAATGCTGCAAGGAAAAGGGTTATTTGGAGTTATAA 2247 0.4121 MEEGRGRVCDTGGNGFIGSWIIKRLLEDGYSVNATIRSHPDLSFLTNLPGASQKLQIFKNADLNKPESFKEAIEEGCMGVFHVATPLDLDDPEEVLTKRSIDGALGILKACIASKAVNRVVYTSSGTLTEKAMLEVGEDNGLDVVTLLPTHVVGPFICPKLHGPYRTSLDLAFGTYLQTPAVHVDELARAQIFLLEHPNPKGRYICSACLRLLQDGYSVNATIRPHPEHKKDVNFLTNLPGASQKLQILKADLNSPESFKDALECSTWQAQWIFSKNGPEHLVTKRSIDGALRILEACLTSKTVNRDESAWSDVDYLRSSKTFGLWSYAISKTLREKAVLEFGEENGLDVVTLVPTFVVGTFICPNLPGPILSSLYFAFGDKEPIGYLQTPMVHVDDVATAQIFLLEHPNPKGRYICSACFATLEKVFQVIFVKYPEFQSPSIDSLRERKELKFPDLPSKKLMGAGFESKFGLEELLMDAMACCKEKASSSSCCNTRARLLLLMEESKGRVCVTGGTGFVGSWIIKRLLEGEQRKDVSFLTNLPGASQRLRLLNADLSDPDSFKEAIEGCIGVFHVATIIDFEGKEPEEILTKRSIDVALGILRACLTLKTVKIVVYTSRAIAVSYYGKEDKTLTEKAVLEFGEQNGLDAVTVIPPLIVGPFICKRLPVSVHPCLYFIFDKKDPSGYLQINVVHVDDLARAHIFLLEHPNPKGRYNCSTYAGFEYKYGLEEMLEDTIECCKEKGYLEL 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0739 748 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 209 432 IPR036291 -
Lele43g0739 748 Pfam NAD dependent epimerase/dehydratase family 315 411 IPR001509 -
Lele43g0739 748 Pfam NAD dependent epimerase/dehydratase family 511 716 IPR001509 -
Lele43g0739 748 Gene3D - 508 632 - -
Lele43g0739 748 Gene3D - 210 489 - -
Lele43g0739 748 Gene3D - 633 746 - -
Lele43g0739 748 Gene3D - 5 127 - -
Lele43g0739 748 Gene3D - 128 209 - -
Lele43g0739 748 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 11 125 IPR002225 GO:0003854|GO:0006694|GO:0016616
Lele43g0739 748 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 126 208 - -
Lele43g0739 748 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 11 208 IPR036291 -
Lele43g0739 748 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 504 745 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0739 Lele-ChrLele43 6751702 6768518 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0739 507 718 Monolignol Biosynthesis Gene Families AT2G02400 31.174 9.36e-32 124