Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0736 ATGGAAGCGAGAGAAGGAATTAGTTCAGGGGTTACGGTAATTGGAGCAGAAGCTCCATCAGCCTATCATATGGCACCAAGAACTGAAGCACCAAGCCAGAATCAAGTTCCTGAAGTACTAGCGGCAGCGGCACCAAATATTGGTGCCTCGCCAGTGAGTGTGGGAATGGATGGAACAGCAGTCAAGAAGAAACGAGGTAGACCAAGGAAGTATGGTCCCGACGGTTCTGTGGCTATGGCATTGTCACCTTTGCCAATTTCATCTTCAGCTCCACTTTCCAATGACTTCTCATCTGGGGGGAAGCGGGGCAAATCGGCAGGAATGGGGTACAAGAAACATAAGAAACTTGGATTGGATCATTTGGGTGATTTGAATGCCTGTTCCCTTGGAACAAACTTCATGCCTCATATAATCACAGTCAATGCTGGCGAGGATATTACAATGAAGGTTATATCTTTTTCTCAACAAGGACCCCGGGCTATATGCATCCTCTCTGCTACTGGTGTGATTTCTAATGTTACACTACGTCAGCCTGATTCTTCAGGGGGTACTTTGACCTATGAGGGTCGCTTTGAGATACTATCACTGTCTGGATCATTCATGCCTACTGAGAACCAAGGAACAAGAAGCAGGTCAGGTGGAATGAGCGTCTCTTTGGCAAGCCCTGACGGTCGTGTTGTAGGCGGTGGAGTTGCTGGTCTTCTTATTGCTGCCAGTCCTGTGCAGGTGGTGGTGGGAAGTTTTCTACCAAGCAATCATCAAGACCCGAAACCAAAGAAGTCCAAATCTGACTATGCACCACCAGCTAGTATTACCCCGCCAACAGTCCCTGTTTCTACTGCACCACCCTCAACTAATGCTGAAAAAGAAGACGGCTTGGGTGGCGGTGGACATGTCCTGCAAAATTCTGGAGACCTGAATTCCAACTTGACATCTCCTTCACCATTCCGACGAGAAAATTGGGTGAACATGCACTCTATGCCAGATTTGAGACAGTCAGCTACCGACATTAACATCTCCCTGCCAGATAGTTAA 1035 0.4773 MEAREGISSGVTVIGAEAPSAYHMAPRTEAPSQNQVPEVLAAAAPNIGASPVSVGMDGTAVKKKRGRPRKYGPDGSVAMALSPLPISSSAPLSNDFSSGGKRGKSAGMGYKKHKKLGLDHLGDLNACSLGTNFMPHIITVNAGEDITMKVISFSQQGPRAICILSATGVISNVTLRQPDSSGGTLTYEGRFEILSLSGSFMPTENQGTRSRSGGMSVSLASPDGRVVGGGVAGLLIAASPVQVVVGSFLPSNHQDPKPKKSKSDYAPPASITPPTVPVSTAPPSTNAEKEDGLGGGGHVLQNSGDLNSNLTSPSPFRRENWVNMHSMPDLRQSATDINISLPDS 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0736 344 Pfam Plants and Prokaryotes Conserved (PCC) domain 135 248 IPR005175 -
Lele43g0736 344 Gene3D - 135 263 - -
Lele43g0736 344 ProSiteProfiles PPC domain profile profile. 130 269 IPR005175 -
Lele43g0736 344 MobiDBLite consensus disorder prediction 301 319 - -
Lele43g0736 344 CDD DUF296 135 248 IPR005175 -
Lele43g0736 344 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 31 312 IPR039605 GO:0003680
Lele43g0736 344 MobiDBLite consensus disorder prediction 249 319 - -
Lele43g0736 344 FunFam AT-hook motif nuclear-localized protein 1-like 135 265 - -
Lele43g0736 344 SUPERFAMILY AF0104/ALDC/Ptd012-like 133 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0736 Lele-ChrLele43 6726442 6731436 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0736 10 281 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 55.263 6.62e-99 295