Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0734 ATGGATTGTGGGTGTATTAAGAATGATAACAATGGTTATTGTGGTGGTAGGGACGGTGATCGTGATGGTCAGAGACCTTGTGGGGCGTGCAAGTTCCTGAGAAGAAAGTGCGTGAAGGGATGTGTATTTGCACCCTACTTCGACTCCGATCAAGGCACGGCTCACTTCGCGGCGGTGCACAAGGTGTTCGGAGCCAGCAACGCCGCCAAGCTTCTGCTGAGAATCCCTCCTCACCACCGTCTCGACGCCGTCCTCACTCTCTCCTACGAGGCTCTCTCTAGGGCTCGAGATCCCGTGTATGGCTGCGTGGCCCATATCTTCACCCTTCAACAACAGGTGATGAACTTGCAGGCTGAGTTAGCTTATGTGCAAGCTCGTCTTTCGACGGTGCAGTGTCTCCCGACGATGGCGGCGGTGGCAACTCTTCCTCAGCCGGAGACCTCTTCGAACAATGAGTTTCCCTTCGATCCAACTAATTCACTTTATCAGTTCTCAACTTTCCTCAACCCTTGTGATCTTCAACACGATGGGGATCTTCAAGCTCTAGCCAGAGATTTTGTATCAAGGTAA 570 0.5211 MDCGCIKNDNNGYCGGRDGDRDGQRPCGACKFLRRKCVKGCVFAPYFDSDQGTAHFAAVHKVFGASNAAKLLLRIPPHHRLDAVLTLSYEALSRARDPVYGCVAHIFTLQQQVMNLQAELAYVQARLSTVQCLPTMAAVATLPQPETSSNNEFPFDPTNSLYQFSTFLNPCDLQHDGDLQALARDFVSR 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0734 189 ProSiteProfiles LOB domain profile. 25 127 IPR004883 -
Lele43g0734 189 Pfam Lateral organ boundaries (LOB) domain 26 124 IPR004883 -
Lele43g0734 189 PANTHER LOB DOMAIN CONTAINING PROTEIN 24 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0734 Lele-ChrLele43 6700711 6705485 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0734 29 189 AS2 family AT2G45410 62.805 1.20e-65 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele43g0734 LOB 2.7e-36 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele41g0657 41 16493200 16498148 Lele43g0734 43 6700711 6705485 hybridization
Lele42g0651 42 19484566 19490818 Lele43g0734 43 6700711 6705485 hybridization