Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0730 ATGGATCCAGTAGCTGCTCAAGGTCGTCCTCTTCCACCACCTTTTCTCACCAGAGATCTTCATCTTCATCCCCATCATCAATTTCAGAGCCACCATAATCACAATCGCTCCGCCGCCGCCGCCGACGATGAGCAGGTCGGTAATGGCAGCTTGAACCGTGGTCAGAAGCGAGATCACGAGAATACCGTCACTGAGGGGAAGGAATTATTGGATTCTAACACAGCTTCTGCCGGTGACGGTGCCGGTGCCGGAGATGGCGATGGGGATAATAGTGGTAGAAGGCCTCGTGGAAGACCCGCCGGTTCGAAGAACAAGCCCAAGCCTCCGATCATCATAACGAGGGATAGCGCCAACGCGCTTAGGTCCCATGTCATGGAGATCGCAAACGGCGGAGATATCATGGAGAGTGTCGCCACCTTCGCGCGGCGGAGGCAGCGTGGGGTTTGCATTCTCAGTGGAAGTGGCACCGTCACGAATGTCACCCTCCGGCAGCCCGCTTCACCCGGTGCAGTTGTCACCTTATATGGAAGATTCGAGATTCTATCACTGTCCGGCTCGTTCCTGCCGCCGCCAGCACCACCAGCCGCTTCGGGGCTGGCCATATATCTCTCCGGCGGACAGGGTCAAGTAGTCGGAGGCACCGTGGTGGGACCCTTGATGGCGTCAGGCCCAGTGGTCATTATGGCTGCTTCGTTCGGAAATGCGGCGTACGAGAGGCTGCCGTTGGAGGAGGAGGAGACCCCAGTGTCGGTGAACGGAAGCGGAGGGTTAGGCTCGCCGGGAGGAATTGTGGGACAGCAGCAACAATCACAGAATCAACAGCAACAAATCGTCGGAGATCCTAACACACCACCATCAATGTTTCATGGAGTTCCTCAGAATCTTCTGAATTCTTGCCAATTACCAGCTGAAGGATTCTGGGGTGGAGGCAGCACCGTTCGTCCTCCATTCTAA 954 0.5629 MDPVAAQGRPLPPPFLTRDLHLHPHHQFQSHHNHNRSAAAADDEQVGNGSLNRGQKRDHENTVTEGKELLDSNTASAGDGAGAGDGDGDNSGRRPRGRPAGSKNKPKPPIIITRDSANALRSHVMEIANGGDIMESVATFARRRQRGVCILSGSGTVTNVTLRQPASPGAVVTLYGRFEILSLSGSFLPPPAPPAASGLAIYLSGGQGQVVGGTVVGPLMASGPVVIMAASFGNAAYERLPLEEEETPVSVNGSGGLGSPGGIVGQQQQSQNQQQQIVGDPNTPPSMFHGVPQNLLNSCQLPAEGFWGGGSTVRPPF 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0730 317 MobiDBLite consensus disorder prediction 261 282 - -
Lele43g0730 317 Gene3D - 120 250 - -
Lele43g0730 317 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 57 298 IPR014476 GO:0003680
Lele43g0730 317 MobiDBLite consensus disorder prediction 25 111 - -
Lele43g0730 317 ProSiteProfiles PPC domain profile profile. 117 255 IPR005175 -
Lele43g0730 317 CDD DUF296 121 188 IPR005175 -
Lele43g0730 317 FunFam AT-hook motif nuclear-localized protein 120 247 - -
Lele43g0730 317 MobiDBLite consensus disorder prediction 246 282 - -
Lele43g0730 317 PIRSF ESCAROLA 16 317 IPR014476 GO:0003680
Lele43g0730 317 SUPERFAMILY AF0104/ALDC/Ptd012-like 117 250 - -
Lele43g0730 317 Pfam Plants and Prokaryotes Conserved (PCC) domain 121 233 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0730 Lele-ChrLele43 6629521 6630474 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0730 1 317 AT-hook Motif Nuclear Localized (AHL) Family AT2G45430 61.702 7.87e-87 261