Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0715 ATGGATTCCAAGAAGTCTAACAAGATCACAGATATCGTTAGGCTTCAGCGAGTCCTCAAGAAATGGAAGAAAGTGGCCAATGCTTCCAAGAACAACTCTTCTGCTTTTGCTGCTGTTACTGCTTCTCCGTCGTCGTCTTCTTCTTCTGAAATCAATAACAGTACCATTAGTAGAACCGGTAGTGGTGGAAGTAAAGGCATCAAGTTCTTGAGGAGAACTCTGTCCTTCACAGATCTTTCTGCTTCAAATGAGAGTGTCCCAAAAGGCTTTCTTGCTGTTTGTGTGGGAATAGAACTCAAGAGATTCATTATCCCAACAGAGTATTTGAGACACCAAGCTTTTGAGATGTTGCTGAGAGAAGCTGAAGAGGAGTTTGGTTTTCAACAGGAAGGAGTACTCAAGATTCCTTGCCAAGTTTCAGTGTTTGAGAAAGTATTGAAGGTTGTGCAAGGCAAAAAGGAAGCATTTTTGCCCCAAGATAAGGACCAGATGATTCCTTGTTATATTTCAGATTGTGATGCTACTACTACATCTTCTCATCAAGCTCAAATGTGTAGATGA 561 0.4118 MDSKKSNKITDIVRLQRVLKKWKKVANASKNNSSAFAAVTASPSSSSSSEINNSTISRTGSGGSKGIKFLRRTLSFTDLSASNESVPKGFLAVCVGIELKRFIIPTEYLRHQAFEMLLREAEEEFGFQQEGVLKIPCQVSVFEKVLKVVQGKKEAFLPQDKDQMIPCYISDCDATTTSSHQAQMCR 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0715 186 MobiDBLite consensus disorder prediction 42 61 - -
Lele43g0715 186 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 68 145 IPR003676 GO:0009733
Lele43g0715 186 Pfam Auxin responsive protein 53 148 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0715 Lele-ChrLele43 6453648 6454208 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0715 1 186 Calmodulin-binding Proteins AT2G24400 50.000 2.35e-56 174