Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0708 ATGCCAAAGTCCTACGAAGCTTCTGGGGTAAGGAAGACCCCAGTGGCTATGGTCTTGTCTTGTGGACCTCACATGCAAAGAGGTCAGGAAGTTCGACTTCGACACATCGCTAGCCTTCACAAATCACACATCAGAGCCTCTGCTACAAATTTCCCCATCAATGATAGACACTCTTCTATCTATTCTGTCTTCCTGAAACTTGTTTACCCAATTCGATCTCTGATTCCTAGTTCATCGTCTGTCTTCCGATCCAGTCTCTGTCTGAAAATGCCGGCTGTGTACGGAGCTCGCCTGACCACCTTCGAAGACTCCGAGAAGGAGAGTGAATATGGTTACGTTCGTAAGGTATCAGGACCAGTCGTGGTTGCAGATGGCATGGCTGGAGCTGCTATGTATGAACTAGTGCGTGTTGGTCGTGACAACCTCATTGGTGAAATTATTCGTTTGGAAGGGGATTCTGCTACTATCCAAGTTTATGAGGAAACAGCTGGCTTAATGGTCAATGATCCTGTCTTACGAACACACAAGCCTTTATCAGTGGAGTTGGGGCCTGGAATATTGGGAAATATTTTTGATGGAATTCAGAGGCCATTGAAAACTATTGCTAAACGATCTGGTGATGTCTACATTCCTCGTGGTGTCTCTGTTCCAGCACTTGATAAAGATACACTCTGGGAGTTTCAGCCTAAAAAAATTGGTGAAGGAGACCTATTAACTGGGGGAGATCTCTATGCTACTGTTTTTGAGAACAGTTTAATGCAGCACCACATTGCACTTCCTCCTGATGCTATGGGAAAAATTACTTACCTCGCACCACCTGGACAATATTCCTTGAAGGATACTGTATTGGAGCTTGAGTTTCAAGGTGTTAAAAAACAGTTCACCATGCTCCAGACTTGGCCTGTTCGTACACCAAGGCCAGTTGCATCAAAACTTGCGGCTGATACTCCTCTGCTCACTGGTCAGCGTGTTCTTGATGCCCTCTTCCCCTCTGTTCTTGGTGGCACTTGTGCTATTCCTGGGGCTTTTGGTTGTGGCAAAACTGTCATCAGTCAAGCTCTTTCTAAGTATTCCAACTCTGATTCTGTTGTCTATGTTGGTTGTGGGGAACGTGGAAATGAAATGGCTGAAGTTCTTATGGACTTTCCACAACTTACAATGACATTGCCTGATGGTCGGGAAGAATCTGTCATGAAGCGTACAACACTGGTGGCTAACACTTCGAACATGCCTGTGGCTGCTCGTGAGGCTTCAATTTATACAGGAATCACTTTAGCTGAGTATTTTAGAGATATGGGTTACAATGTCAGCATGATGGCAGATTCAACTTCTAGATGGGCAGAAGCATTGCGTGAAATTTCTGGGCGGCTGGCAGAAATGCCTGCTGATAGTGGATATCCTGCTTACCTTGCTGCACGTTTAGCTTCTTTCTATGAACGTGCTGGCAAAGTAAAATGCCTTGGAGGTCCTGAACGCACTGGTAGTGTCACAATTGTTGGTGCTGTTTCTCCTCCAGGAGGAGATTTCTCAGATCCTGTGACATCTGCAACCCTCAGCATAGTTCAGGTTTTCTGGGGTTTAGACAAAAAGCTTGCCCAGAGGAAGCATTTCCCTTCTGTTAACTGGCTTATTTCCTATTCAAAGTATGCTGCGGCATTAGAATCATTCTACGAGCAATTTGATCCAGATTTTATTAACATTAGGACAAAGGCTCGTGAAGTTTTACAGAGAGAAGATGACCTGAATGAAATTGTCCAGCTTGTTGGAAAGGATGCTTTGGCTGAAGGAGATAAGATCACCTTGGAAACTGCAAAGCTTTTGAGAGAGGATTATCTTGCTCAGAATGCTTTTACTCCATATGACAAATTCTGTCCCTTCTACAAGTCCGTTTGGATGATGCGGAACATCATCCATTTCTACAATTTGGCAAATCAGGCAGTAGAGAGGGGAGCTGGCACAGATGGTCAAAAGATAACTTACACCCTCATCAAGCATCGCTTGGGAGATCTCTTCTACCGTTTAGTGTCTCAGAAATTTGAGGATCCAGCAGAAGGGGAAGCAACTCTGGTTGAAAAATTTAAGAAATTACATGAGGACCTGACTAATGGTTTCCGCAACCTCGAGGACGAAACCCGGTGA 2139 0.4474 MPKSYEASGVRKTPVAMVLSCGPHMQRGQEVRLRHIASLHKSHIRASATNFPINDRHSSIYSVFLKLVYPIRSLIPSSSSVFRSSLCLKMPAVYGARLTTFEDSEKESEYGYVRKVSGPVVVADGMAGAAMYELVRVGRDNLIGEIIRLEGDSATIQVYEETAGLMVNDPVLRTHKPLSVELGPGILGNIFDGIQRPLKTIAKRSGDVYIPRGVSVPALDKDTLWEFQPKKIGEGDLLTGGDLYATVFENSLMQHHIALPPDAMGKITYLAPPGQYSLKDTVLELEFQGVKKQFTMLQTWPVRTPRPVASKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDSVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITLAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYAAALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVERGAGTDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEATLVEKFKKLHEDLTNGFRNLEDETR 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0708 712 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 321 547 IPR000194 GO:0005524
Lele43g0708 712 Gene3D - 109 178 IPR023366 -
Lele43g0708 712 PANTHER V-TYPE PROTON ATPASE CATALYTIC SUBUNIT A 98 710 IPR022878 GO:0046034|GO:0046961
Lele43g0708 712 Coils Coil 690 710 - -
Lele43g0708 712 FunFam V-type proton ATPase catalytic subunit A 548 701 - -
Lele43g0708 712 SUPERFAMILY N-terminal domain of alpha and beta subunits of F1 ATP synthase 106 178 IPR036121 GO:0046034|GO:1902600
Lele43g0708 712 CDD ATP-synt_V_A-type_alpha_C 564 670 - -
Lele43g0708 712 ProSitePatterns ATP synthase alpha and beta subunits signature. 538 547 IPR020003 GO:0005524
Lele43g0708 712 FunFam V-type proton ATPase catalytic subunit A 109 178 - -
Lele43g0708 712 Pfam ATPsynthase alpha/beta subunit N-term extension 191 312 IPR031686 -
Lele43g0708 712 Hamap V-type ATP synthase alpha chain [atpA]. 108 711 IPR022878 GO:0046034|GO:0046961
Lele43g0708 712 FunFam V-type proton ATPase catalytic subunit A 283 546 - -
Lele43g0708 712 CDD V_A-ATPase_A 177 549 - -
Lele43g0708 712 Gene3D - 180 546 IPR027417 -
Lele43g0708 712 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 291 550 IPR027417 -
Lele43g0708 712 SUPERFAMILY C-terminal domain of alpha and beta subunits of F1 ATP synthase 560 642 - -
Lele43g0708 712 CDD ATP-synt_V_A-type_alpha_N 110 176 - -
Lele43g0708 712 FunFam V-type proton ATPase catalytic subunit A 223 294 - -
Lele43g0708 712 Pfam ATP synthase alpha/beta family, beta-barrel domain 114 174 IPR004100 GO:0046034|GO:1902600
Lele43g0708 712 TIGRFAM V-ATPase_V1_A: V-type ATPase, A subunit 109 700 IPR005725 GO:0033180|GO:0046961|GO:1902600
Lele43g0708 712 Gene3D - 548 701 IPR024034 -
Lele43g0708 712 Gene3D - 223 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0708 Lele-ChrLele43 6384704 6392535 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0708 90 712 Primary Pumps ATPases(2) AT1G78900 93.740 0.0 1216