Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0690 ATGAGAGAGATACAGCCACCAGAGCCGACAGATAGTCTTCGTGTGGCAGAAGCAACTTGTGTGGGCTCACTGGATTTATATTTTCTTTTCAAATCCGAGATGAGCTCTGTAGAGAAGGTAGACCTTGATTTTGATGAGGAGGTCCCTTTTAGCTCCTCAACAAATCCGGAGAAAGTCCATGCTTTTCAATCTGAGACAAATCATGTGCTTTCTTCCGTAAATTTGGCCAGCTATTCCATCTTCAAGCAAATCGGGATAAGACCTATCAGGAGCATATACCTTGTCTTAATTAAAGCGAAGATCAACATGTTGCTGCCTTTTGGTCCCTTAGCCATATTGCTACATTATCTAACAGGAAAACATGCATGGGTGTTCTTCTTCGCCCTAGTGGGTATTACTCCTTTGGCGGAACGTCTGGGTTATGCTACTGAGCAACTTGCATTTTTTACAGGACCAACAGTTGGGGGTTTGCTAAATGCCACATTTGGCAATGCAACTGAAATGATCATATCGATTTATGCTTTGAAAAATGGGATGATTAGGGTTGTTCAGCAATCTTTACTGGGCTCAATCCTGTCAAATATGCTTCTTGTTCTGGGATGTGCATTCTTTACTGGTGGGATTGTCCACCACCAAAAGGTTCAGGATTTCAACAAGGCATCTGCTGTTGTGAATTCTGGGTTGCTATTGATGGCTGTAATGGGAATACTGTTTCCTGCTGTGCTTCACTTTACTCACTCAGAGGTTCACTTTGGCAAGTCAGAGGTTTCTCTGTCCAGATTTAGTAGCTGTATAATGCTAATAGCTTATGCTAGCTACCTTTTCTTTCAACTAAGAAGTCAACACAATAATTATAGTTCACTTGAAGAGGAAGGAGATAGTACTGAAAATTCTGATGAGGAAGAAGAATGTGAATTAACAAAATGGGAGGCAATAGGCTGGCTTGCTATTTTGACAGCATGGGTTTCTATTTTATCTGGATACCTCGTGGATGCCATTCAGGGGGCATCTGAGTCATGGAATATGCCAGTGGCATTCATTAGTGTCATATTGCTTCCAATTGTCGGAAATGCTGCAGAGCACGCAAGTGCTATCATGTTTGCTATGAAGGACAAGCTAGATATTACGCTTGGAGTTGCTATTGGATCATCTACTCAGATATCTATGTTTGTGATCCCCTTTTGTGTGGTAGTCGGATGGTGCATGGGAAAACCAATGGACTTGAATTTTCAACTCTTTGAGACTGCTACTCTTTTTATCACCGTGCTCGTTGTTGCATTTATGTTGCAGGATGGGACCTCTAATTATTTCAAAGGCTTGATGCTTATTCTATGCTATCTCATTGTCGCGGCCAGTTTCTTCGTACATGTGGACCCCCCCAAAAACACCAAAAACGGTGAAGGCCAATAA 1410 0.4199 MREIQPPEPTDSLRVAEATCVGSLDLYFLFKSEMSSVEKVDLDFDEEVPFSSSTNPEKVHAFQSETNHVLSSVNLASYSIFKQIGIRPIRSIYLVLIKAKINMLLPFGPLAILLHYLTGKHAWVFFFALVGITPLAERLGYATEQLAFFTGPTVGGLLNATFGNATEMIISIYALKNGMIRVVQQSLLGSILSNMLLVLGCAFFTGGIVHHQKVQDFNKASAVVNSGLLLMAVMGILFPAVLHFTHSEVHFGKSEVSLSRFSSCIMLIAYASYLFFQLRSQHNNYSSLEEEGDSTENSDEEEECELTKWEAIGWLAILTAWVSILSGYLVDAIQGASESWNMPVAFISVILLPIVGNAAEHASAIMFAMKDKLDITLGVAIGSSTQISMFVIPFCVVVGWCMGKPMDLNFQLFETATLFITVLVVAFMLQDGTSNYFKGLMLILCYLIVAASFFVHVDPPKNTKNGEGQ 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0690 469 FunFam Vacuolar cation/proton exchanger 152 291 - -
Lele43g0690 469 Gene3D - 152 291 IPR044880 -
Lele43g0690 469 Gene3D - 300 455 IPR044880 -
Lele43g0690 469 TIGRFAM caca2: calcium/proton exchanger 95 454 - -
Lele43g0690 469 TIGRFAM cax: calcium/proton exchanger 104 454 IPR004798 GO:0006816|GO:0015369
Lele43g0690 469 Pfam Sodium/calcium exchanger protein 312 451 IPR004837 GO:0016020|GO:0055085
Lele43g0690 469 Pfam Sodium/calcium exchanger protein 121 278 IPR004837 GO:0016020|GO:0055085
Lele43g0690 469 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 71 459 IPR004713 GO:0006812|GO:0008324|GO:0016020
Lele43g0690 469 FunFam Vacuolar cation/proton exchanger 299 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0690 Lele-ChrLele43 6202492 6208636 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0690 89 462 Antiporters AT3G13320 76.800 0.0 588