Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0685 ATGGTTGCTTCTTCGTCCCGTGCAGTGGAAGCAACACCTACGACATCCCTTGGGTTGAGAAGTATCGACCCACCAAGGTCTCCGACATCGTCGGTAATGAAAATGTTGTCTCCAGGCTCCAAGCTATTGCTCGCAACACCTATGACATCCCTTAGGCATTGGTTGGGAGAAATTTTGGGTCATTCTCATTTTGTGGTTATGGGTTTTGATTCTGATTCCTACCCTCATTGGGTTCTTGCATCTGATTTTGAATTTTGTTGTGTTGGGTGTGTGTGTGTGATAATGGTGAAGCTGTCACAGAGGAAGGTGAAGAACGCTGAAAACAGCATCAAGCCTTCAAACACGAAGACGAAGAGGACTCGCAAAAGCATTCCCAGGGATTCTCCTCCGCAACGAAGCTCCGTTTATCGAGGCGTCACTAGGCATCGTTGGACGGGTCGGTATGAAGCTCATCTCTGGGATAAGAATTGCTGGAATGAATCGCAGAGCAAGAAAGGAAGACAAGGGGCATATGATGAAGAAGAAGCTGCAGCACATGCCTATGACTTGGCAGCATTAAAGTACTGGGGTCAAGACACCATCCTCAATTTTCCTCTCACCAATTATGAAGAAGAGCTCAAGGAGATGGAGGGCCAATCAAAAGAAGAATACATTGGATCCTTAAGAAGAAAAAGCAGTGGATTCTCACGAGGAGTCTCAAAATACAGAGGCGTAGCAAGACACCATCACAATGGAAGATGGGAAGCTCGCATTGGCAGAGTCTTCGGCAACAAATACCTGTATCTCGGAACTTACGCTACACAAGAAGAAGCAGCCACAGCATATGATATGGCAGCAATAGAATACAGAGGAGTTCACGCCGTTACAAACTTTGACCTCAGCCGTTACCTCAATTGGCTCCGTCCTCAAACACAAGAAGACTCCAATGAAAACCCTACTACCGAGTCTGCTGGATCAGACTCTTCTAAACCTGAACTTGAATTGGCTTTTGTGTCCCACCAGCTCAGTTCAAACTCCGATGACAAGAAGGCGGCCCCTCCACGATCTGGCGGCGGGGCTCTGGCGTCGTCTGCACTAGGGCTCCTCTTGCAATCGTCAAAGTTTAAGGAAATGCTGGAGAGGACTTCATCAGCTGGAGACCATCATAGTTACCCTGCAACAACAACTTCAGAATCAAAGCTTCCTCGTCGTACATTTCCTGAAGATATTCAAACATTCTTTGATTGTCATGATTCATCAAGCAGCTACACTGAAACTGATGACATCATATTTGGTGATTTGAGCTCAATTGCCGATGCTCCAATTTTCCATTGCGAGCTGGATGCTTAG 1329 0.4658 MVASSSRAVEATPTTSLGLRSIDPPRSPTSSVMKMLSPGSKLLLATPMTSLRHWLGEILGHSHFVVMGFDSDSYPHWVLASDFEFCCVGCVCVIMVKLSQRKVKNAENSIKPSNTKTKRTRKSIPRDSPPQRSSVYRGVTRHRWTGRYEAHLWDKNCWNESQSKKGRQGAYDEEEAAAHAYDLAALKYWGQDTILNFPLTNYEEELKEMEGQSKEEYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYATQEEAATAYDMAAIEYRGVHAVTNFDLSRYLNWLRPQTQEDSNENPTTESAGSDSSKPELELAFVSHQLSSNSDDKKAAPPRSGGGALASSALGLLLQSSKFKEMLERTSSAGDHHSYPATTTSESKLPRRTFPEDIQTFFDCHDSSSSYTETDDIIFGDLSSIADAPIFHCELDA 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0685 442 MobiDBLite consensus disorder prediction 302 321 - -
Lele43g0685 442 MobiDBLite consensus disorder prediction 1 30 - -
Lele43g0685 442 Gene3D AP2/ERF domain 233 294 IPR036955 GO:0003700|GO:0006355
Lele43g0685 442 Gene3D AP2/ERF domain 135 200 IPR036955 GO:0003700|GO:0006355
Lele43g0685 442 MobiDBLite consensus disorder prediction 302 323 - -
Lele43g0685 442 MobiDBLite consensus disorder prediction 372 397 - -
Lele43g0685 442 ProSiteProfiles AP2/ERF domain profile. 234 292 IPR001471 GO:0003700|GO:0006355
Lele43g0685 442 SUPERFAMILY DNA-binding domain 233 294 IPR016177 GO:0003677
Lele43g0685 442 CDD AP2 233 294 IPR001471 GO:0003700|GO:0006355
Lele43g0685 442 FunFam AP2-like ethylene-responsive transcription factor 233 294 - -
Lele43g0685 442 PRINTS Ethylene responsive element binding protein signature 136 147 IPR001471 GO:0003700|GO:0006355
Lele43g0685 442 PRINTS Ethylene responsive element binding protein signature 274 294 IPR001471 GO:0003700|GO:0006355
Lele43g0685 442 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 111 357 - -
Lele43g0685 442 FunFam AP2-like ethylene-responsive transcription factor 134 200 - -
Lele43g0685 442 SUPERFAMILY DNA-binding domain 134 199 IPR016177 GO:0003677
Lele43g0685 442 MobiDBLite consensus disorder prediction 380 394 - -
Lele43g0685 442 SMART rav1_2 135 204 IPR001471 GO:0003700|GO:0006355
Lele43g0685 442 SMART rav1_2 234 298 IPR001471 GO:0003700|GO:0006355
Lele43g0685 442 ProSiteProfiles AP2/ERF domain profile. 135 198 IPR001471 GO:0003700|GO:0006355
Lele43g0685 442 MobiDBLite consensus disorder prediction 107 136 - -
Lele43g0685 442 Pfam AP2 domain 134 190 IPR001471 GO:0003700|GO:0006355
Lele43g0685 442 Pfam AP2 domain 233 284 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0685 Lele-ChrLele43 6140340 6147919 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0685 131 296 AP2-EREBP Transcription Factor Family AT5G57390 70.414 4.30e-84 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Lele43g0685 AP2 7.6e-10 CL0081