Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0680 ATGGTAAGTCATGGTCGTAATACCGATCTTGATCCATTTTTCGCCGCTCTTAGAAACTGCAGCCGTCTAGAGGAGCTTGAATTGGCCGGCATGGGCCTTGGAGGAAGGTTCTCCGACGCCGTCTGTCAAGTTGGCATCAAACTAAAAGAAGCAATGGGCAACTGTCTAAATCTGGGTCTGCTTGATCTGTCGTGCAATGAATTTACGGGACGGATTCCAGAAAGCTTGGGAAAGTTGGATCGGTTGTATTCTCTGTCTCTCAATAATAACCACCTCACAGGAAATGTACCTTCTACATTAGGACCGTGCATTGCTCTGTATAGGCTTGACTTGTCCTATAATAGATTAACAGTAACCATCCCACAAGAAATCTCAGGCCTGCCAGGCCTGCATGAAATTAGAATTTTCATAAACTTCTCACATAACCAACTAGAAGGTCCCCTGCCAATTGAGCTCAGCAAACTAGAAAAGGGAACTGAGTTAAGTGGAAAACCAGCAAGAAGTGAACTGATAATTAACTTCCCAAGAATCACATACAAGGAACTATCAGAGGCTACCGGAGGATTTGATGATCAGAGACAAGTAGGATCAGGTTGTCATGGACGTGTCTATAGAGGAGTTCTTCCAGATGGAACCCCAGTAGCAGTCAAGGTGCTGCATTTGAAATCTGGAAATTCCACCAAGAGCTTCAATAGAGAATTCCCAGTTTTAAAGAGGATTCGACACAGGAACCTGATAAGAATTATCACTGCATGTTCTCTACCTGATTTTAAAGCTCTTGTTCTGTCTTATATGGCCAATGGGAGTTTGGAGAGCCATCTCTATGCTTCTCCTGGATCTTCTGACTTGAGTCTCATCCTGAGTGTGAATATTTGCAGCGACATCGCTGAAGATTTTGGGATTGCAAGGTTAATTATGAGTGTCGAAGGAGGAAATACTGGGTTTAATGATAACATGGGGAGCTCCACTGCAAATTTGTTATGTGGATCTATTGAATACATTGTACCAGAGTATGGATTTGGATCAAATACATCTACAAAAGAAGATGTGTACAGCTTCGGCATTCTTTCTCAGGAGGTGAAAAGAATGTGGGGAGTTGCAATTGGAGAGTTAATTGAGCTGGGGATCCTTTGCACAATGGAATCACCTTCTACAAGGCCTAGTATGCTTGATGTAGCAGACGACTTGGATCGTCTCAAGATATACCTTACTGGGGACACAACTAGAACTTTTGCATCATTTGTTGGAATTTCATCTTCTCCCATAGATGATTTTTAA 1278 0.4257 MVSHGRNTDLDPFFAALRNCSRLEELELAGMGLGGRFSDAVCQVGIKLKEAMGNCLNLGLLDLSCNEFTGRIPESLGKLDRLYSLSLNNNHLTGNVPSTLGPCIALYRLDLSYNRLTVTIPQEISGLPGLHEIRIFINFSHNQLEGPLPIELSKLEKGTELSGKPARSELIINFPRITYKELSEATGGFDDQRQVGSGCHGRVYRGVLPDGTPVAVKVLHLKSGNSTKSFNREFPVLKRIRHRNLIRIITACSLPDFKALVLSYMANGSLESHLYASPGSSDLSLILSVNICSDIAEDFGIARLIMSVEGGNTGFNDNMGSSTANLLCGSIEYIVPEYGFGSNTSTKEDVYSFGILSQEVKRMWGVAIGELIELGILCTMESPSTRPSMLDVADDLDRLKIYLTGDTTRTFASFVGISSSPIDDF 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0680 425 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 170 264 - -
Lele43g0680 425 PANTHER OS04G0122200 PROTEIN 169 362 - -
Lele43g0680 425 Gene3D Ribonuclease Inhibitor 5 173 IPR032675 -
Lele43g0680 425 ProSiteProfiles Protein kinase domain profile. 189 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele43g0680 425 FunFam Leucine-rich repeat receptor protein kinase EMS1 48 138 - -
Lele43g0680 425 SUPERFAMILY L domain-like 16 160 - -
Lele43g0680 425 SUPERFAMILY Protein kinase-like (PK-like) 168 403 IPR011009 -
Lele43g0680 425 Pfam Protein tyrosine and serine/threonine kinase 192 297 IPR001245 GO:0004672|GO:0006468
Lele43g0680 425 ProSitePatterns Protein kinases ATP-binding region signature. 195 217 IPR017441 GO:0005524
Lele43g0680 425 Gene3D Phosphorylase Kinase; domain 1 174 264 - -
Lele43g0680 425 Gene3D Transferase(Phosphotransferase) domain 1 298 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0680 Lele-ChrLele43 6084305 6087287 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0680 16 360 Receptor kinase-like Gene Family AT5G46330 27.842 7.22e-33 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Lele43g0680 PK_Tyr_Ser-Thr 5e-13 CL0016