Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0672 ATGGCAGACCTCAAAGAGCGGCTACTACTTCCCCCAAAACCGGCATCAGCTCTTAATGTGAGAGAGTCGGTCAATCGACCATCGGCATCTGGAAGGCAACCTTTACAAGGAGTGGATGTTTTGGGGCTAAAGAAGCGAGGTCAAGGTCTTCGATCATGGATTCGTGTTGACACATCTGGAAACTCTCAGGTTATTGAAGTAGACAAGTTCACTATGATGCGACGGTGTGATCTACCTGCACGTGATCTTCGCCTACTGGATCCTTTGTTTGTGTATCCATCAACTATCTTGGGAAGAGAAAAGGCCATTGTTGTAAATCTTGAGCAGATACGGTGTATTATTACAGCAGATGAAGTTCTTCTCTTGAATTCTCTAGATAGTTATGTATTACACTATGTGATGGAGTTGCAACGTCGGCTAACTACTGCTGGAGTAGGTGAGGTTTGGCAGTTGGACAATGCTGATATGAGCCGAAGAAGAGGAAGTAGGAATGTTGACAATTCCTTTAACAACACGTCCCCTGATTATCTGCCTTTTGAGTTTAGGGCTCTTGAAGTTGCCTTGGAGTCAGCATGCACATTTCTTGACAATCAGGCAGCAGAGTTAGAAATTGAGGCCTATCCTTTACTGGACGAGTTAACGTCAAAGATCAGTACATTAAATTTGGAACGTGTTCGTCGCTTGAAAAGTAGACTTGTTGCCTTGACTAGGAGAGTTCAGAAGGTTAGAGATGAAATAGAGCAGCTAATGGATGATGATGGCGATATGGCTGAAATGTACCTCACAGAGAAGAAAAGTCGGATGGAGTCATCATTTTTTGGAGATCATCAGTCTATGGGATATAAATCAATTGATGCCGCATCAATTTCTGCACCAGTTTCTCCTGTTTCTTCACCTCCTGATGCTCGGAGGCTTGATAAATGCTTGAGCATTGCAAGGAGTCGACATGAAAGCATGAAAAGTACAGAAAGTGCTACAGACAGTATAGAGGAGCTTGAGATGTTGCTGGAAGCTTACTTTGTGGTAATTGACAGCACTTTGAACAAGTTGACATCGTTGAAAGAGTACATTGATGACACAGAAGATTTCATAAACATCCAACTAGACAATGTACGAAATCAGCTGATCCAATTTGAGCTTCTACTCACAACGGCGACATTTGTGGTTGCCATTTTTGGCGTGGTAGCAGGAGTGTTTGGGATGAACTTTGAAATCCCATTATTTGATGTACCCTCCGCATTCAACTGGGTCCTTACAATTACAGGAATTTGTGGGATCTTGATATTTAGTGCGTTTGTGTGGTTCTTCAAATACAGAAGGCTCATGCCCCTATAG 1335 0.4285 MADLKERLLLPPKPASALNVRESVNRPSASGRQPLQGVDVLGLKKRGQGLRSWIRVDTSGNSQVIEVDKFTMMRRCDLPARDLRLLDPLFVYPSTILGREKAIVVNLEQIRCIITADEVLLLNSLDSYVLHYVMELQRRLTTAGVGEVWQLDNADMSRRRGSRNVDNSFNNTSPDYLPFEFRALEVALESACTFLDNQAAELEIEAYPLLDELTSKISTLNLERVRRLKSRLVALTRRVQKVRDEIEQLMDDDGDMAEMYLTEKKSRMESSFFGDHQSMGYKSIDAASISAPVSPVSSPPDARRLDKCLSIARSRHESMKSTESATDSIEELEMLLEAYFVVIDSTLNKLTSLKEYIDDTEDFINIQLDNVRNQLIQFELLLTTATFVVAIFGVVAGVFGMNFEIPLFDVPSAFNWVLTITGICGILIFSAFVWFFKYRRLMPL 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0672 444 Gene3D Magnesium transport protein CorA, transmembrane region 382 442 - -
Lele43g0672 444 FunFam Magnesium transporter MRS2-1 41 124 - -
Lele43g0672 444 FunFam Magnesium transporter MRS2-1 382 442 - -
Lele43g0672 444 Gene3D Magnesium transport protein CorA, transmembrane region 131 375 - -
Lele43g0672 444 Gene3D - 40 124 - -
Lele43g0672 444 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 28 442 IPR039204 -
Lele43g0672 444 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 381 434 IPR045863 -
Lele43g0672 444 Pfam CorA-like Mg2+ transporter protein 334 435 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Lele43g0672 444 CDD Mrs2_Mfm1p-like 53 441 IPR039204 -
Lele43g0672 444 Coils Coil 225 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0672 Lele-ChrLele43 6004495 6007206 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0672 1 444 MRS2 Gene Family AT1G16010 84.270 0.0 747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele41g0718 41 17110304 17115143 Lele43g0672 43 6004495 6007206 hybridization
Lele42g0712 42 20173292 20176923 Lele43g0672 43 6004495 6007206 hybridization