Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0671 ATGCCTTCCAGATCCTTCCCTTCCAGTCCCAACCCTCCAAGTTCAAGTTTTTTCATTAAAACCAGGGTCATCTTCCTCGCCCTCACAATCTCAGCTTCTGTTGTAATTGTCTGCTCAATCATCTACTTTCTTTACCACTTATGGCATTCTATAGTACACAGAGCTAAAACCATCCCCTTTGATTCGAGTGCTCCTTTGAAGCTCGAGAGATTCTCATACAAAGAATTGAAGCAAGCCACAAATGGCTTCGACGTCGCCAATGTAATTGGTAAAGGAGGCTCTGGAACTGTCTTCAGAGGAACACTTAAAGATGGGAAATTGATTGCAATTAAGAGGCTAGACGCTTTGTCTTTGCAAACAGAGAGAGAGTTTCAGAATGAGCTTCAGATTCTTGGTGGGTTAAGATCTCCTTTTATTGTAACCCTTTTGGGTTATTGTGTTGAAAAGAACAAGAGAGTTTTGGTGTATGATTACATGCCAAATAGAAGCTTGCAGGAGTCGCTATTTGGAGAATATGAAGATGGGTGTTTGGGTTTGAGCTGGGAGAGAAGGTTCCACATCATTCTAGATGTTTCTCGAGCATTGGAATTCTTGCACCTTGGTTGTGATCCTCCAGTGATTCATGGTGATGTGAAGCCAAGCAATGTTCTTCTTGATTCAAACTTCAGAGGGAATATTTCAGACTTTGGATTATCAAGAATCAAAGTGGAGAATGAGTTTGGTGTTGATTTGTTTAGCCAGGACTTGGGGAAGAGTCAAGAACTATGGAAAAGCCAAGAACTTTCAGGTAATTTAACTGCTGAAACTACTCCAACTGCAGCTATTGGTACACCAGTTGAGAGTGTTAATAATGAAGTAGATTTTGCTTTAGCTTTGCAAGCATCTTCATCTTCTAAAAATAGCAAGACATGCTTTAATGTTAAAGCTTTGAGCTTGAATTCTTTCAATTACAATGCCAATATTGCAAATGAGAGTGAAATTAGGAGCTGTTGTAATGCAAAGGGAAAGGAAATATCAATTCTAGACAATATTGGTGGGGATGATTGGAATCAGAAATTTGTTCCTTATGATGATGAGTTCTCTAGCATTGATCATAGTAAGGAATTAAGTACTGTAAATGCTTCTTCTATGGATGAAGAGAAAATAAATGGGAAACAATGGGGAAAAGATTGGTGGTGGAGACAAGATGGATCTGATGAATTATGTAGCAGAGATTATGTGATGGAGTGGATTGGGAGTCAAATTTGTCCATCAAACCCTGATTGGGTAGAAGAAAAGAAGAACATTAATGAAAAACCAGAGTTGGAAACTTCAAGTCCTGTGGATAATCATAAAGCAGATGAAGCAAATGGGACCCAATTACAAGCATTTGTAGTAGGAGATGCAGATAATGTGGTTGAGAAGAAGAAAGAAACAAGGGGGAAGAAAAACTGGAAGAAAAAGCCGAGGAAGATGCAAGAATGGTGGAAAGAAGAGCACCTTGCTGAATTAAGCAAGAAGAGTAGTAGTAATAGTAAGCTGAAGAATCTTCAAACCAAGTGGAAGAAAGGCTTCAAAGTGCCACATTTTGACTTGGGAAGAAGGTTTTATCTTTGCAGGCGAAGGAGAAACTTCGCTGATGAAGAAGCTCAGGATGATGGGAGCGATCAAAATGGTGGTGAGTTCAGTTTCAGAAGAGGTTGGAGGAAGAAAAGTACTCGTTCCATCTGTAGCGACGTGTGGAGTGGAGATCTGTTCAGCCGCGAGCTCAGCAGCACAACAAGCATGAGAGGAACACTGTGTTATGTTGCACCAGAATATGGAGGTTGCGGATACTTAATGGAGAAAGCTGATATTTACAGTTTGGGAGTTTTGATTCTTGTGATTGTGTCAGGAAGAAGACCATTACATGTTCTTGCATCTCCAATGAAGTTAGAGAAAGCCAACTTAATAAGCTGGTGCAGGCACTTGGCTCATTCTGGTAACATTTTAGAGCTAGTAGATGAGAGACTTGAATATTACAAGAAGGAGCAAGCAAGCTTGTGTATCAACTTGGCACTTGCTTGCTTACAGAAGATTCCGGAATTGAGGCCGGATATCGGGGACATTGTCAAGATTTTGAAGGGCGAAATGGACCTTCCACCACCACCATTCGAGTTTTCACCGTCTCCTCCTTCCAAGTTTTACAACAAATCAAGGACAAAACAGAAGAGACCTCCAGAATAA 2205 0.405 MPSRSFPSSPNPPSSSFFIKTRVIFLALTISASVVIVCSIIYFLYHLWHSIVHRAKTIPFDSSAPLKLERFSYKELKQATNGFDVANVIGKGGSGTVFRGTLKDGKLIAIKRLDALSLQTEREFQNELQILGGLRSPFIVTLLGYCVEKNKRVLVYDYMPNRSLQESLFGEYEDGCLGLSWERRFHIILDVSRALEFLHLGCDPPVIHGDVKPSNVLLDSNFRGNISDFGLSRIKVENEFGVDLFSQDLGKSQELWKSQELSGNLTAETTPTAAIGTPVESVNNEVDFALALQASSSSKNSKTCFNVKALSLNSFNYNANIANESEIRSCCNAKGKEISILDNIGGDDWNQKFVPYDDEFSSIDHSKELSTVNASSMDEEKINGKQWGKDWWWRQDGSDELCSRDYVMEWIGSQICPSNPDWVEEKKNINEKPELETSSPVDNHKADEANGTQLQAFVVGDADNVVEKKKETRGKKNWKKKPRKMQEWWKEEHLAELSKKSSSNSKLKNLQTKWKKGFKVPHFDLGRRFYLCRRRRNFADEEAQDDGSDQNGGEFSFRRGWRKKSTRSICSDVWSGDLFSRELSSTTSMRGTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPLHVLASPMKLEKANLISWCRHLAHSGNILELVDERLEYYKKEQASLCINLALACLQKIPELRPDIGDIVKILKGEMDLPPPPFEFSPSPPSKFYNKSRTKQKRPPE 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0671 734 Gene3D Transferase(Phosphotransferase) domain 1 562 705 - -
Lele43g0671 734 Gene3D Transferase(Phosphotransferase) domain 1 159 278 - -
Lele43g0671 734 Pfam Protein kinase domain 85 236 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele43g0671 734 Gene3D Phosphorylase Kinase; domain 1 59 158 - -
Lele43g0671 734 SMART serkin_6 83 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele43g0671 734 FunFam Receptor-like serine/threonine-protein kinase At4g25390 52 158 - -
Lele43g0671 734 SUPERFAMILY Protein kinase-like (PK-like) 62 721 IPR011009 -
Lele43g0671 734 FunFam Receptor-like serine/threonine-protein kinase At4g25390 558 706 - -
Lele43g0671 734 PANTHER OS07G0586332 PROTEIN 1 729 IPR044576 -
Lele43g0671 734 MobiDBLite consensus disorder prediction 708 734 - -
Lele43g0671 734 FunFam putative receptor-like protein kinase At1g80870 159 273 - -
Lele43g0671 734 ProSitePatterns Serine/Threonine protein kinases active-site signature. 206 218 IPR008271 GO:0004672|GO:0006468
Lele43g0671 734 ProSitePatterns Protein kinases ATP-binding region signature. 89 111 IPR017441 GO:0005524
Lele43g0671 734 ProSiteProfiles Protein kinase domain profile. 83 711 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0671 Lele-ChrLele43 6000047 6002251 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0671 586 700 Receptor kinase-like Gene Family AT3G58690 32.479 2.01e-11 64.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Lele43g0671 Pkinase 8.1e-26 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele41g0719 41 17117412 17119616 Lele43g0671 43 6000047 6002251 hybridization
Lele42g0713 42 20178980 20181187 Lele43g0671 43 6000047 6002251 hybridization