Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0663 ATGCATCCTGGAAACACGTCAACCCAGTTGGATCCACAAAACTGCAGAAAGTTCGAGGATTTGAGTTTATTGGATACTTTCATCTTCTCGGTTTCGCTGCGACAAGGTCTTTTGGTTCAATTTCCTTTATTAGGAAAGCTTTTGACGTTGTCTGCTGCTATGGATTATTCATCATGGATTAACACTTCCTTGGACCTCAACCTTAACCCTAGTTCCAGAGTCAACGAAGATATTCCTAAAAAGGAGGTGGAAAGCAACTTTTTTGCATTAGAGTTGAAGTCATCGTCTCCTTCAAGACAAGAGACGAGTGGTGGTGATCTGGAGGAGGAATTGAAGAGGGTGAGTGCAGAAAACAAGAAGCTGACTGAAATGCTGACAGAGATGTGTGAGAATTACAATACTTTGAGGAACTTATCTGAATATATGAGAAACAACAACAACAATAATAATTCAGAAAAGGAGATGAGCCCACCAAAGAAGAGGAAATCTGAAAGCAGCAATGATAACAACAATAATAGCAATCCAATTGGGGTTTATGGTGGAAACAATAATAACTCTGAGAGCAGTTCAACTGATGAAGAATCAAGCAAGAAACCAAGGCATGAGATCATCAAAGCAAAAATCTCTAAACTTTATGTCAGAACTCCACCATCTGATACAACCCTTATTGTGAAAGATGGATACCAATGGAGGAAATATGGGCAAAAGGTGACCAGAGACAACCCTTGTCCAAGAGCATACTTCAAATGCTCTTTTGCTCCCTCATGCCCTGTCAAAAAGAAGGTTCAAAGAAGTGTGGAGGATCAATCCATTGTGGTGGCAACTTATGAAGGAGAGCATAATCATCAACAGCCTTCTCAAATGGAGGCAGCAGGGTCGGGTTCAAGCCGAGGCCTAGTACCGAGTTCATCGTCTTCTATGAGGCCTTCTCCTCCTCCTCCAAAAGTTAAAGTTGACATGAAAAGGTCCAAATCCTTCCCTGAATCCACAAACTCACTTCCAAAGAAAGACTCATCTGAAGTCCCTCAGGTTTTGGTGGAACAGATGGCCACCTCGTTGACAAAGGATCCGAATTTCAGATCAGCACTTTTAGCAGCCATCTCAGGAAGAATGTTGAACAACAATTAG 1128 0.4176 MHPGNTSTQLDPQNCRKFEDLSLLDTFIFSVSLRQGLLVQFPLLGKLLTLSAAMDYSSWINTSLDLNLNPSSRVNEDIPKKEVESNFFALELKSSSPSRQETSGGDLEEELKRVSAENKKLTEMLTEMCENYNTLRNLSEYMRNNNNNNNSEKEMSPPKKRKSESSNDNNNNSNPIGVYGGNNNNSESSSTDEESSKKPRHEIIKAKISKLYVRTPPSDTTLIVKDGYQWRKYGQKVTRDNPCPRAYFKCSFAPSCPVKKKVQRSVEDQSIVVATYEGEHNHQQPSQMEAAGSGSSRGLVPSSSSSMRPSPPPPKVKVDMKRSKSFPESTNSLPKKDSSEVPQVLVEQMATSLTKDPNFRSALLAAISGRMLNNN 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0663 375 Pfam WRKY DNA -binding domain 225 283 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele43g0663 375 ProSiteProfiles WRKY domain profile. 219 285 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele43g0663 375 FunFam WRKY transcription factor 40 209 286 - -
Lele43g0663 375 SUPERFAMILY WRKY DNA-binding domain 220 285 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele43g0663 375 MobiDBLite consensus disorder prediction 141 200 - -
Lele43g0663 375 MobiDBLite consensus disorder prediction 167 190 - -
Lele43g0663 375 SMART WRKY_cls 224 284 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele43g0663 375 MobiDBLite consensus disorder prediction 325 342 - -
Lele43g0663 375 MobiDBLite consensus disorder prediction 278 342 - -
Lele43g0663 375 MobiDBLite consensus disorder prediction 278 305 - -
Lele43g0663 375 Gene3D WRKY domain 210 286 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele43g0663 375 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 90 371 IPR044810 GO:0003700
Lele43g0663 375 Coils Coil 104 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0663 Lele-ChrLele43 5948210 5950150 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0663 57 375 WRKY Transcription Factor Family AT1G80840 50.606 2.88e-90 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele43g0663 WRKY 9.4e-23 CL0274