Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0662 ATGGCCAGAGTCAACGAACAGCCCCCGCATCAGAACCAGAACGACTCTCCCCGAAGCATTCTGTTCAACAAGTACGAGATGGGGAGGCTCCTGGGTCAAGGAAATTTCGCGAAAGTCTATTACGGCAGGAACCTTGTAACCAACGAGAGCGTCGCGATTAAGGTTATCAAGAAAGAGAAGCTCAAGAAAGAGAGGCTTATGAGGCAGATCAAGCAAGAGGTATCTGTGATGCGATTGGTTCGTCACCCTCACATCGTCGAGCTCAAGGAAGTTATGGCTACAAAAGGCAAAATATTTCTAGTTATGGAGTATGTTAAAGGTGGAGAATTGTTCTCCAAGGTTGCCAAAGGCAAGCTTACAGAAGATGTCGCCAGAAAATATTTCCAGCAATTGATTAGCGCCATTGATTTCTGTCACAGCCGTGGAGTCACGCACCGTGATCTGAAACCTGAGAATCTACTTTTGGACGAGAACGAAGAGCTCAAGGTTTCCGATTTTGGGTTGTCGGCGTTGCCGGAGCAGCGTCGATCCGACGGGATGCTCATCACGCCGTGTGGAACTCCGGCTTACGTGGCGCCGGAGGTGCTGAAGAAGAAAGGGTATGATGGATCGAAAGCTGATATTTGGTCATGTGGTGTGATTCTCTATGCTCTGCTTTCTGGGTATTTGCCATTTCAGGGTGAGAATATTATGAAGATTTACAAGAAAGCATTCAAAGCTGAGTACGAATTCCCAGATTGGATTTCACCGGAAGCTAAGAATTTGATCTCTAATCTTCTAGTCGCCGACCCAGAAAAGAGATACTCGATCCCAGATATCATGAAGGACCCATGGTTTCAAATTGGGTTCATGAGACCAATCGCGTTTTCGATAAAGAAGGAGCCGGGTTTCGATTTCGACGAGGAGGAGAATAATAATGATGATGATGAAGTGAAAAGTCAGAAAGAAGGAGGAGGAGAAGCATCAGCAGTAATAAGATCAGAGAAACCATCTCGACCATTTTACAATGCGTTTGAGATAATCTCATCATTATCAAATGGGTTTGATCTGAGGAGCTTGTTCGAGACACGAAAGAGGTCGCCGTCGATGTTCCTGTCGAAGCTTTCGGCTCCGACGGTTGTGGCGAAGCTGGAGACGGTGGCAAAGAAGCTGAATTTTAAGATCACAGGGAGGAAGGAGTACAAGGTGAGGATGCAGGGGGAAACAGAGGGAAGGAAGGGGAAGCTGGCCATGATGGTGGAGGTGTTCGAGGTGGCGCCGGAGGTGGCGGTGGTGGAATTCTCCAAGTCGGCTGGCGATACGCTCGAGTACATAAAATTCTGTGAGGAAGAAGTGCGGCCCGCACTGAAAGACATAGTCTGGAGCTGGCAAGGAGATAGTACTAATAATAATAACAGTAGTCATCAAAATTAA 1413 0.472 MARVNEQPPHQNQNDSPRSILFNKYEMGRLLGQGNFAKVYYGRNLVTNESVAIKVIKKEKLKKERLMRQIKQEVSVMRLVRHPHIVELKEVMATKGKIFLVMEYVKGGELFSKVAKGKLTEDVARKYFQQLISAIDFCHSRGVTHRDLKPENLLLDENEELKVSDFGLSALPEQRRSDGMLITPCGTPAYVAPEVLKKKGYDGSKADIWSCGVILYALLSGYLPFQGENIMKIYKKAFKAEYEFPDWISPEAKNLISNLLVADPEKRYSIPDIMKDPWFQIGFMRPIAFSIKKEPGFDFDEEENNNDDDEVKSQKEGGGEASAVIRSEKPSRPFYNAFEIISSLSNGFDLRSLFETRKRSPSMFLSKLSAPTVVAKLETVAKKLNFKITGRKEYKVRMQGETEGRKGKLAMMVEVFEVAPEVAVVEFSKSAGDTLEYIKFCEEEVRPALKDIVWSWQGDSTNNNNSSHQN 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0662 470 ProSitePatterns Serine/Threonine protein kinases active-site signature. 143 155 IPR008271 GO:0004672|GO:0006468
Lele43g0662 470 SMART serkin_6 25 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele43g0662 470 Coils Coil 53 73 - -
Lele43g0662 470 FunFam Non-specific serine/threonine protein kinase 17 104 - -
Lele43g0662 470 SUPERFAMILY Protein kinase-like (PK-like) 21 280 IPR011009 -
Lele43g0662 470 CDD CIPK_C 336 450 - -
Lele43g0662 470 Gene3D Kinase associated domain 1, KA1 334 455 - -
Lele43g0662 470 Gene3D Transferase(Phosphotransferase) domain 1 18 333 - -
Lele43g0662 470 ProSiteProfiles Protein kinase domain profile. 25 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele43g0662 470 FunFam Non-specific serine/threonine protein kinase 330 454 - -
Lele43g0662 470 MobiDBLite consensus disorder prediction 297 323 - -
Lele43g0662 470 Pfam NAF domain 334 389 IPR004041 GO:0007165
Lele43g0662 470 ProSitePatterns Protein kinases ATP-binding region signature. 31 58 IPR017441 GO:0005524
Lele43g0662 470 ProSiteProfiles NAF domain profile. 330 355 IPR018451 GO:0007165
Lele43g0662 470 FunFam Non-specific serine/threonine protein kinase 18 321 - -
Lele43g0662 470 Pfam Protein kinase domain 25 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele43g0662 470 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 13 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0662 Lele-ChrLele43 5923290 5924702 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0662 2 464 CBL-interacting serine-threonine protein kinases AT5G25110 61.987 0.0 587
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lele43g0662 Pkinase 6.4e-77 CL0016