Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0661 ATGAACATGCTATTCAACACACCTGTTTGGATTGGTGTCCTTTTAACAGGGCTCAGTACATTGATCCTATTAACATTACAGCAATATGGGGTAGGGACGAAACTTGAGTTCTTGATTGCATTTCTGGTGTTCGCAATTGCTGCGTGCTTTTTCGTTGAACTTGGGTATGCGAAGCCTGGTGCTAAAGAAGTTTTGGAGGGTCTTTTTCTACCAAAACTCCAAGGGAATGGTGCTACTGGTTTTGCAATTTCACTCCTCGGGGCTATGGTTATGCCGTACGCACAATCTCTTTCTCCACTCGGCGCAGGAGGCATGCAGATTTTACATAATAGAAAGTGCCTTTGCTCTCATGGTGGCTTTCCTCATAAATGTTTCCTTTATCTCCGTGAGTGGCGCTGTTTGCAATTCCTCGAATTTGATGCGGAAGATCAAGTGAGCTGTCAGGATTTGGACTTGAACAAAGCCACCTTTCTGCTAAAAAATGTACTCGGTAAATGGAGTTCAAAACTGTTTGCGATCGCTTTGCTAGGTTCTACTATAACAGGAACATATGCAGGGCAATATGTCATGCAGGGATTTCTTGATTTGCGATTGAAACCATGGATTCGAAATTTTTTAACTCGTTTAGCCATAGCCCGTAGTTTAATTGTCGTGGTCATCGGTGGTCCTGCAGGGGCAGGGAAGCTCATAATTATTGCATCTATATCAGTTTTGACATGGATCATAGGTTCGCTGATAATGGCCATAAATATTTACTACTTACTGACGGGCTTCATAAAGTTGCTTCTTCATAGAGATTTGGAAATTGTGGGTAAGGTGTTTGTGGGGATTTTAGGGTTTTCAGCCATAGCCGTATATTTGGCCAGGATCGCTTATCTGGTGTTCCGCAAGAACAAGAAGGCAACACAACTTCTGGCACTAACAACCCCTGAAAATAGGCAAATGGAAAATGAACAAGGCAATGGATCAATGTATTCTCTCCCAAGAGAAGACATAGTTAGCATGCAGTTGCCTCAGAGAAGTAACTTAATTGGCTGA 1038 0.4258 MNMLFNTPVWIGVLLTGLSTLILLTLQQYGVGTKLEFLIAFLVFAIAACFFVELGYAKPGAKEVLEGLFLPKLQGNGATGFAISLLGAMVMPYAQSLSPLGAGGMQILHNRKCLCSHGGFPHKCFLYLREWRCLQFLEFDAEDQVSCQDLDLNKATFLLKNVLGKWSSKLFAIALLGSTITGTYAGQYVMQGFLDLRLKPWIRNFLTRLAIARSLIVVVIGGPAGAGKLIIIASISVLTWIIGSLIMAINIYYLLTGFIKLLLHRDLEIVGKVFVGILGFSAIAVYLARIAYLVFRKNKKATQLLALTTPENRQMENEQGNGSMYSLPREDIVSMQLPQRSNLIG 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0661 345 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 146 235 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele43g0661 345 PRINTS Natural resistance-associated macrophage protein signature 82 105 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele43g0661 345 PRINTS Natural resistance-associated macrophage protein signature 203 220 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele43g0661 345 PRINTS Natural resistance-associated macrophage protein signature 32 53 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele43g0661 345 PRINTS Natural resistance-associated macrophage protein signature 175 194 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele43g0661 345 PRINTS Natural resistance-associated macrophage protein signature 6 25 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele43g0661 345 Pfam Natural resistance-associated macrophage protein 1 97 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele43g0661 345 Pfam Natural resistance-associated macrophage protein 150 241 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0661 Lele-ChrLele43 5900654 5903313 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0661 1 345 Inorganic Solute Cotransporters AT1G15960 56.359 9.15e-130 379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele41g0728 41 17222849 17224928 Lele43g0661 43 5900654 5903313 hybridization
Lele42g0725 42 20300915 20304960 Lele43g0661 43 5900654 5903313 hybridization