Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0660 ATGGGGTTGGTAATTGTGGTGGACTCTATAAAAAGCCATGCCTTGATTCACTTTCTATCGTCAAGCCAGATCATCTTCTTCCCCCTCCAACTTCGTCCTTCTTTCTCTCTCCTCCTCACCAACCCCCGCACCCTCTTTACTGTATCACACGCTTCTTCCCATTCCGAATTCGATCGTCTCTGTTTACAGATAATCTTAACACTTGCCACCATGCCTGCTGCCGCCGCCGCCACCACCCCTACCGCTGCCTCATCAGGTGCCGGCCAAACCGTCTGCGTCACTGGCGCCGGTGGCTTCATCGCCTCTTGGATTGTCAAGCTTTTCCTTGAGAGAGGCTACACTGTTAGAGGCACCGTCAGAAATCCAGATGATTCTAAGAACGCGCACTTGAAAGAGTTGGAAGGAGCACAGGAGAGGCTAACTCTTCATAAGGTTGATCTTCTTGATCTTGAGTCTGTGAAAGCTGTTATCAATGGCTGTGATGGCGTCATTCACACGGCTTCTCCCGTCACAGACAACCCCGAAGAGATGGTGGAGCCTGCAGTGAATGGAACAAAGAATGTGATCATCGCAGCTGCTGAAGCGAAAGTGCGGAGAGTAGTGTTCACGTCATCCATTGGAGCAGTCTACATGGACCCCAACAGAAACATTGATGAGGTGGTTGATGAGTCTTGCTGGAGCAATTTGGATTATTGCAAGAACACAAAGAATTGGTATTGCTATGGGAAGGCAGTGGCAGAGAAATCAGCATGGGATGAGGCAAAAGCAAGAGGGGTGGATTTGGTTGTGGTGAATCCAGTTTTGGTGCTGGGACCATTGCTTCAATCCACCATAAATGCAAGCACAATTCACATCCTCAAGTATCTCACTGGCTCTGCTAAGACCTATGCAAATGCCACCCAGGCTTATGTACATGTTAAGGATGTTGCATTGGCCCATGTTCTTGTTTATGAGACTCCTTCTGCCTCCGGTCGTTATTTATGTTCCGAGAGATCCCTCCACCGTGGAGAACTGGTCGAGATCCTCGCCAAGTACTTCCCAGAATATCCAACTCCTACCAAATGTTCGGACGAGAAGAATCCGAGAGCAAAACCCTACACATTCTCTAACAAGAGGCTGAAGGATTTAGGATTAGAGTTTACAACAGTTCATCAGTGTCTATACGACACCGTTAAGAGCCTGCAGGACAAAGGCCATCTTCCTCTTCTCACCAAGCAAGCAGAAGAATCTGTTCAGACTAAATCCTAG 1248 0.4832 MGLVIVVDSIKSHALIHFLSSSQIIFFPLQLRPSFSLLLTNPRTLFTVSHASSHSEFDRLCLQIILTLATMPAAAAATTPTAASSGAGQTVCVTGAGGFIASWIVKLFLERGYTVRGTVRNPDDSKNAHLKELEGAQERLTLHKVDLLDLESVKAVINGCDGVIHTASPVTDNPEEMVEPAVNGTKNVIIAAAEAKVRRVVFTSSIGAVYMDPNRNIDEVVDESCWSNLDYCKNTKNWYCYGKAVAEKSAWDEAKARGVDLVVVNPVLVLGPLLQSTINASTIHILKYLTGSAKTYANATQAYVHVKDVALAHVLVYETPSASGRYLCSERSLHRGELVEILAKYFPEYPTPTKCSDEKNPRAKPYTFSNKRLKDLGLEFTTVHQCLYDTVKSLQDKGHLPLLTKQAEESVQTKS 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0660 415 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 90 391 - -
Lele43g0660 415 Gene3D - 81 415 - -
Lele43g0660 415 CDD FR_SDR_e 91 378 - -
Lele43g0660 415 FunFam Cinnamoyl-CoA reductase 1 82 413 - -
Lele43g0660 415 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 87 394 IPR036291 -
Lele43g0660 415 Pfam NAD dependent epimerase/dehydratase family 91 322 IPR001509 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0660 Lele-ChrLele43 5893280 5896209 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0660 88 354 Monolignol Biosynthesis Gene Families AT1G80820 76.779 9.46e-147 416