Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0649 ATGAACGAAAATTTCTTCTTCCTTCCAGCTCCTCTCACAACACCATGCAGCTGCGTTACCGTCACAAACGTGCCACCTTCTCCGCCACCACCTCTGGAGGGAATCGCCGCCGTGGTGGGTCAGCACGTGCTCTTCGGACACAACCACTCAACCACCTCCGCCACTGCCAACATTAACAGCAAAAACCACGACCTCAACGGCTCAAAAGCGTTCATGTCGGTGCAGAAACGAGAAAACAAGAGCACAACCACGGGTGGGAGTAGTCTGTCGGTGAACAAGAGCTACAGGGGAGTGAGGAAGAGGCCGTGGGGGAGGTGGTCGGCTGAGATACGCGACAGAATCGGGCGGTGTCGGCACTGGCTGGGTACGTTCGACACGGCGGAAGAGGCAGCCCGTGCGTACGACGCTGCAGCAAGGCGACTGAGAGGCGCTAAAGCGAGAACTAACTTCGAGATACCTTCAGTACTGCCATTATCGTCACCTTCTTCTTCATCTTCAAATTCAAGCTCAGAAATGAAAAGCAAGGGGAAGGCTATGGGGAATAACACTAAAAAATGCTGTGTGGTTACCTCTGTAGCTCAATTGTTCAGTGTGGTGCCTGAAACTGTGAGAGAAAATAATAATGATGGTAATGAGAAGAAGACAAGTTCATCAGGTTTTGGTAACAATGTAGAACTAGACTTGAAGCTAGGTAGATCCACGAGAATGGTCGTGTAG 717 0.5105 MNENFFFLPAPLTTPCSCVTVTNVPPSPPPPLEGIAAVVGQHVLFGHNHSTTSATANINSKNHDLNGSKAFMSVQKRENKSTTTGGSSLSVNKSYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGAKARTNFEIPSVLPLSSPSSSSSNSSSEMKSKGKAMGNNTKKCCVVTSVAQLFSVVPETVRENNNDGNEKKTSSSGFGNNVELDLKLGRSTRMVV 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0649 238 ProSiteProfiles AP2/ERF domain profile. 94 151 IPR001471 GO:0003700|GO:0006355
Lele43g0649 238 FunFam Ethylene-responsive transcription factor 2 93 152 - -
Lele43g0649 238 Coils Coil 127 147 - -
Lele43g0649 238 Pfam AP2 domain 94 143 IPR001471 GO:0003700|GO:0006355
Lele43g0649 238 SMART rav1_2 94 157 IPR001471 GO:0003700|GO:0006355
Lele43g0649 238 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 75 203 - -
Lele43g0649 238 CDD AP2 93 152 IPR001471 GO:0003700|GO:0006355
Lele43g0649 238 MobiDBLite consensus disorder prediction 203 224 - -
Lele43g0649 238 MobiDBLite consensus disorder prediction 154 177 - -
Lele43g0649 238 MobiDBLite consensus disorder prediction 154 180 - -
Lele43g0649 238 PRINTS Ethylene responsive element binding protein signature 95 106 IPR001471 GO:0003700|GO:0006355
Lele43g0649 238 PRINTS Ethylene responsive element binding protein signature 117 133 IPR001471 GO:0003700|GO:0006355
Lele43g0649 238 SUPERFAMILY DNA-binding domain 94 151 IPR016177 GO:0003677
Lele43g0649 238 Gene3D AP2/ERF domain 93 152 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0649 Lele-ChrLele43 5759764 5760480 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0649 13 197 AP2-EREBP Transcription Factor Family AT1G80580 45.550 3.34e-28 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele43g0649 AP2 2.9e-15 CL0081