Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0646 ATGGAGGGATCTGGAGAGAACTGGCCCTATTATCAGGTAATGGACATGAACACGAATCTGGAGAAAGCGATTAACTATGTGAGCTATCTGGAGGGGAGAGTGAGAGAGCTTGAGAACCAGAACAAGACGAGCGCGGAGGCGTGCCCAGCTTATAATAATAGCAACTACTACGACGGCGCGTCGTCGTCGTGCTGTGAGAGGAGCGTGGACGATGAGTGGTACGAGGCGGCGCTGCCGGAGGTGAAAGCGAGGGTTTCGGAGAATGAAGTGCTGATAATAATTCACTGTGAGAAACAAAAGGGAATTATGCATAAAATATTGTCTCAGCTTGAAACTCTTCATCTCTCTGTTATCAGTAGCAGCGTCTTGCCCTTTGGGAAATTCACTCTTGACATCACCATCGTTGCTCAGATGGGGGAAGGATTCAACACAACGGTGAGTGGCATAGTGAAAAGCCTGAGACGAGCCATCTCCAAGTAA 480 0.4875 MEGSGENWPYYQVMDMNTNLEKAINYVSYLEGRVRELENQNKTSAEACPAYNNSNYYDGASSSCCERSVDDEWYEAALPEVKARVSENEVLIIIHCEKQKGIMHKILSQLETLHLSVISSSVLPFGKFTLDITIVAQMGEGFNTTVSGIVKSLRRAISK 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0646 159 PANTHER BHLH TRANSCRIPTION FACTOR 14 157 - -
Lele43g0646 159 Coils Coil 20 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0646 Lele-ChrLele43 5741429 5742516 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0646 9 158 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 39.735 9.32e-27 100
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele38g0479 38 3857618 3859711 Lele43g0646 43 5741429 5742516 CCT
Lele39g0917 39 18124479 18128989 Lele43g0646 43 5741429 5742516 CCT
Lele40g0452 40 3723035 3725128 Lele43g0646 43 5741429 5742516 CCT
Lele41g0748 41 17397299 17398508 Lele43g0646 43 5741429 5742516 hybridization
Lele42g0745 42 20484126 20485848 Lele43g0646 43 5741429 5742516 hybridization