Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0622 ATGCCACTTTCTGAGGCCGACTTAACAATTGGGTTGGTCCATTTACGCTCGGGATTTTTTTTTTCCCAAGTACGAGATGAGGCTAGGAGCCTAAGAGAGGAAAATAGCGAGGATGTTCTAGATCTGACAGGAAAGGAAGACAACGAGGACATTCTAGATTTGACAGGAGAGGAAGACAGCGAGGACGTTCTAGATCTGACAGGAGAGGAAGATAGCAACGACATTCTAGATCTGACAGGAAAGGAAGACAGTGATTCTCCACGTGTTAAGGGAGATGCGGCATGCAAGGTCGGTGGAGGAACTGGAAGAGGAAAGTTAGAAGAACAATTTGGTATCGGAACGATGTCTGCTGCAGTTTGTGGGAGCAAGAGATCTTTCTTCGAAGATATTCCTCCGTCACCTCCGGTATCGAAGAGGCTTCGTTGCTCATCTTCTCCAATTCGTTTCTCCCCTGCGAGCCTCGTCGATCAACTTCAGGCGCTGTTCCCTCAAATGGACGTTCAGCATGGAACTCAGGCCAATAACAACAACAACAACAGCAACAACAATGATTATAATGATAGCAAGAATACCAATAGTGCTATACTGCTTGGAACTTGTATCTTCGTTGTTTTATTGTTGATTGAGCATCTTGAGATAGCCCTCCAAGAATGTGGAAATGATCTAGATGTTGCTACCAAAAGCTTGCATGAGCGTTGCTTGGGATCTGCGGATGGAAATTCTTGTGCTGCTGAACAATCCAATGCTAATGTGGCAACAGATACCTTGGGAGATGAGGAGCATGCTTCTGCATCTGAGATCCAATCAGCTTCGAACGACCTTCCTGCAGATGGAGCAGAATGGGTTGACTTGTTTGTGAGGGAAATGATGAGTGCTATCAGTGTTGATGATGCTAGAATCCGTGCTTCTAGAATGTTGGAGGTTTTAGAGAGATCAATCAGTGGGCATGCCAGTGCTGAGGCAACACATGTTATTCAAAAGGAAAATATGATGTTGAAAGAGCAAATTGAAGGGCTGACTAGGGAGAATACTATTTTAAAGAGTGCTTTTAAAATCCGGCATGAACGTCAGATTGAGTACGAATATAAGAGTCAAGAGTTGCAGCAGATGAAGCAATTGATGTCTCAATACCAGCAACAGTTGAGAACTCTTGAGGTGAATAACTATGCTTTGGCAATGCAGCTGAAGCAGGCTCAGCAGTGCAACTCCTTTCCAGGGCGTTTCAATCCTGATGTCTTCTAA 1242 0.4452 MPLSEADLTIGLVHLRSGFFFSQVRDEARSLREENSEDVLDLTGKEDNEDILDLTGEEDSEDVLDLTGEEDSNDILDLTGKEDSDSPRVKGDAACKVGGGTGRGKLEEQFGIGTMSAAVCGSKRSFFEDIPPSPPVSKRLRCSSSPIRFSPASLVDQLQALFPQMDVQHGTQANNNNNNSNNNDYNDSKNTNSAILLGTCIFVVLLLIEHLEIALQECGNDLDVATKSLHERCLGSADGNSCAAEQSNANVATDTLGDEEHASASEIQSASNDLPADGAEWVDLFVREMMSAISVDDARIRASRMLEVLERSISGHASAEATHVIQKENMMLKEQIEGLTRENTILKSAFKIRHERQIEYEYKSQELQQMKQLMSQYQQQLRTLEVNNYALAMQLKQAQQCNSFPGRFNPDVF 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0622 413 Coils Coil 360 387 - -
Lele43g0622 413 PANTHER UBIQUITIN SYSTEM COMPONENT CUE PROTEIN 115 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0622 Lele-ChrLele43 5498404 5507927 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele38g0461 38 3734753 3738155 Lele43g0622 43 5498404 5507927 CCT
Lele39g0932 39 18234998 18239140 Lele43g0622 43 5498404 5507927 CCT
Lele40g0433 40 3572382 3575928 Lele43g0622 43 5498404 5507927 CCT
Lele41g0775 41 17611031 17614078 Lele43g0622 43 5498404 5507927 hybridization
Lele42g0767 42 20694457 20699388 Lele43g0622 43 5498404 5507927 hybridization