Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0620 ATGGCTTTTTGTCCAATCTTTTGTTTTGGAAAGGGTTCGGATCGCAAATTACGAGGGAAGGCACAACCAACATGGCGAGTCTTTTCCTTAAAGGAGCTACACTCAGCTACAAATAATTTCAATTATGATAATAAACTTGGAGAAGGGGGATTTGGCAGTGTTTACTGGGGCCAGCTTTGGGATGGATCACAAATTGCTGTGAAAAGATTGAAAGTTTGGAGCAACAAAGCAGACATGGAATTTGCTGTTGAAGTCGAGATATTGGCAAGAGTTCGGCACAAGAATCTTCTTAGTCTGCGGGGCTATTGTGCTGAAGGACAGGAACGGTTAATCGTATATGACTATATGCCAAATTTGAGCTTACTCTCTCATCTTCATGGACAGCACTCGGCAGAATGCCTTCTGAATTGGAGCAGACGGATGAGTATTGCAATTGGATCAGCAGAGGGAATCTCATATCTCCACCACCAAGCAACTCCACACATCATCCACAGAGATATTAAAGCAAGCAATGTGCTCTTAGATGCGGATTTCGGGGCTCAGGTTGCAGATTTTGGTTTCGCCAAGTTGATTCCTGATGGGGCAACACATGTGACTACAAGAGTTAAGGGTACCCTTGGCTATCTTGCACCTGAGTATGCTATGTTAGGTAAAGCATCCGAGAGTTGCGATGTCTACAGTTTTGGAATTCTCTTGCTGGAACTTGCGACTGGCAGGAAACCGATTGAAAAACTGAGCACAACAGTGAAGCGGTCGATAACCGATTGGGCACTACCATTGGTTTTAGAGAAGAAATTTAATGAAATTGTAGATGCAAGACTAAATGGTGACTATGTGGAGGAAGAGCTTAAAAGGGTTGTTTATGTTGCACTTGTTTGTGCTCAGAATCAACCTGAGAAGAGACCCAACATGCTGGAGGTGGTAGAGCTATTGAAGGGAGAATCTAAGGTTAAGTGTTCTCAGCTAGAGAATCATGAACTTTTCAGAGGCCCTCAACCTGCCGATTCCAACGATGACGACAGGATACAACCTGCTGAAGATAGTTCTGACTTTATATCAGCAGAAAATGAATCAAAACCTGAGTTGAAGGAGAACCCTGCGCCATAA 1107 0.4354 MAFCPIFCFGKGSDRKLRGKAQPTWRVFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKADMEFAVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNLSLLSHLHGQHSAECLLNWSRRMSIAIGSAEGISYLHHQATPHIIHRDIKASNVLLDADFGAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELATGRKPIEKLSTTVKRSITDWALPLVLEKKFNEIVDARLNGDYVEEELKRVVYVALVCAQNQPEKRPNMLEVVELLKGESKVKCSQLENHELFRGPQPADSNDDDRIQPAEDSSDFISAENESKPELKENPAP 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0620 368 FunFam PTI1-like tyrosine-protein kinase At3g15890 12 115 - -
Lele43g0620 368 PANTHER OS01G0253100 PROTEIN 22 316 IPR045271 -
Lele43g0620 368 Gene3D Transferase(Phosphotransferase) domain 1 116 328 - -
Lele43g0620 368 MobiDBLite consensus disorder prediction 323 368 - -
Lele43g0620 368 Gene3D Phosphorylase Kinase; domain 1 12 115 - -
Lele43g0620 368 SUPERFAMILY Protein kinase-like (PK-like) 22 311 IPR011009 -
Lele43g0620 368 FunFam PTI1-like tyrosine-protein kinase At3g15890 116 327 - -
Lele43g0620 368 ProSitePatterns Protein kinases ATP-binding region signature. 46 68 IPR017441 GO:0005524
Lele43g0620 368 MobiDBLite consensus disorder prediction 332 368 - -
Lele43g0620 368 ProSiteProfiles Protein kinase domain profile. 40 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele43g0620 368 SMART serkin_6 40 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele43g0620 368 Pfam Protein tyrosine and serine/threonine kinase 42 311 IPR001245 GO:0004672|GO:0006468
Lele43g0620 368 ProSitePatterns Serine/Threonine protein kinases active-site signature. 162 174 IPR008271 GO:0004672|GO:0006468
Lele43g0620 368 CDD STKc_IRAK 46 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0620 Lele-ChrLele43 5482095 5484678 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0620 10 317 Trihelix Transcription Factor Family AT1G70460 49.038 7.13e-97 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Lele43g0620 PK_Tyr_Ser-Thr 2.9e-43 CL0016