Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0579 ATGTGTGTTAATAAAACAGCGTGTGTAGCCAGTCTTTCTGTTGTTCCATTAGAAATGGACAGCTTCAAGGCACCTTTCAAGGGCGTTGTTAATGATGTTCGAGGAAGAGCAAAATGTTACAAACAAGACTGGATTTCTGGTCTCTGTTCAGGAATTGGGATATTGGCTCCAACTACCTATATTTTCTTCGCTTCTGCTCTTCCTCTTATAGCCTTCGGAGAACAGCTCGATATAGACACAGACGGAAGCTTGAGCCCAGTAGAGACACTGGCGTCAACTGCGATATGTGGAATGATACACTCGGTTATTGGAGGCCAACCCTTAATAATATTAGGAGTTGCAGAGCCAACTATCGTCATGTACATTTACATGTACACTTTTGCTAAAGATAGAGATGGTTTGGGACGACAACTTTTCTTAGCTTGGGCTGCATGGACTTGCGTTTGGACGGCTCTGATGTTGTTTCTTATTGCAATATTCAATGTTGCTGCCTGGGTACATAGATTCACCAGGATTGCCAGCGAGCTTTTTAGCATGTTGATCACCGTTTTGTTCCTTAAAGAGGCTATCAAGGGAATGGTTAGTGAGTTTAAGGCACCTAAACATGGGATCGAAGACCCAGCATTAGAGAAAAACAAATTTCATTGGCTTTATGTAAATGGACTACTGGGAATTATATTCTCCTTTGGCCTTCTCTTTTCTTCTCTTACGATCAGGAAAGCTAGATCATGGTTATACGGCACAGGAAAGTTGAGGAGTTTCTTTGCAGACTACGGGGTTCCTTTAATGGTAGTACTGTGGACAGCTTTGTCTTTCACAGTACCAATTAGTAAACTTCCCTCTGAAGTCCCTAGAAGGCTCATTGCTCCTCTTGCTTGGGAATCTACTTCTTTACACCATTGGAAAGTCGTCCAAGATATGGTGAAGGTTCCACCTGCATATATTTTTGGTGCTATTATTCCTGCATTCATGATTGCGGGTCTTTACTTCTTCGATCATACTGTTGCTTCTCAGTTAGCAGAACAGAAGGAATTCAATCTGAAGAAACCTTCTGCTCATCACTATGACATGTTGTTGCTAGGATTCCTGACTTTGCTTTGTGGGTTGATTGGTTTGCCACCTTCTAGTGCACTTCTTCCTCAGTCCCCCATGCACACTAAAAGCCTTGCTGTTCTCAAGAACCAGTTGATTCGAAGGAAGATGGTGGAAAGTGCCAAAGAAAGCATAAGGAGCAAAGCAAGCAACTCAGAGATCTATGGAAAAATGCAAGCTGTATTCATAGAAATTGACAAAAGCCCAATTACTTCGGTGGTTAAAGAACTAGAGGACCTAAAAGAAGCAATCCTAAAAGGACAAGAGAAATTGGACAGTACATTATTTAACCCTGAGACACATATTAATGAACATCTGCCCATAAGAGTGAAAGAGCAAAGAGTGAGTAATCTGTTACAGGCAATACTTGTAGGAGCATCAGTGTTTGCTTTACCTCTCTTAAAGAAGATACCCACTTCAGTTCTGTGGGGTTACTTCGCTTACATGGCCATTGATAGTCTTCAAGGAAACCAATTCTGGGAAAGAATACTATATATCCTCATATCCCCTAACAGACGATACAAGGTGTTGGAGGGGGACCATGCTTCATTTGTGGAGACAGTACCATTCAGCGCCATACTAATGTTCACAGTGTTACAATGTGTGTATTTGTTGGTTTGTTTCGGAGTGACTTGGATTCCCATGGCAGGAATGTTGTTTCCTCTGCCATTGTTCTTGCTCATCATAATAAGGCAATATTTGTTACCAAAGCTCTTCAATCCTCACTATTTGAAGGAACTTGATGCTGCTGAATATGAAGAAATTGTGGGCACTTCAAGGCTTTCCTTCCGTCACTCTTCTCGCCTCAATCTCCACCAGGATATGAAATCACCAAGCATGCAATCAAGGGAAATGGAAGATGGCGACGACCACGACGATGAGATATTAAACGAGGCTCTAACAGGTAGAGGAGAGTTAAAATTAAAAGCTATTAGCTTCAGAGAGGAAAGACATGCACATGCACATGTTTTACACAGAGACTTAAACTTAAAGGTCAAAGCTGTTAGTTTCAGAGATGAAAGACATGCACGTGCATTTCAGGGGTTGCAAGTGTATCCTGATGAAATTATAATTGAAACGGATTCGTAG 2181 0.4159 MCVNKTACVASLSVVPLEMDSFKAPFKGVVNDVRGRAKCYKQDWISGLCSGIGILAPTTYIFFASALPLIAFGEQLDIDTDGSLSPVETLASTAICGMIHSVIGGQPLIILGVAEPTIVMYIYMYTFAKDRDGLGRQLFLAWAAWTCVWTALMLFLIAIFNVAAWVHRFTRIASELFSMLITVLFLKEAIKGMVSEFKAPKHGIEDPALEKNKFHWLYVNGLLGIIFSFGLLFSSLTIRKARSWLYGTGKLRSFFADYGVPLMVVLWTALSFTVPISKLPSEVPRRLIAPLAWESTSLHHWKVVQDMVKVPPAYIFGAIIPAFMIAGLYFFDHTVASQLAEQKEFNLKKPSAHHYDMLLLGFLTLLCGLIGLPPSSALLPQSPMHTKSLAVLKNQLIRRKMVESAKESIRSKASNSEIYGKMQAVFIEIDKSPITSVVKELEDLKEAILKGQEKLDSTLFNPETHINEHLPIRVKEQRVSNLLQAILVGASVFALPLLKKIPTSVLWGYFAYMAIDSLQGNQFWERILYILISPNRRYKVLEGDHASFVETVPFSAILMFTVLQCVYLLVCFGVTWIPMAGMLFPLPLFLLIIIRQYLLPKLFNPHYLKELDAAEYEEIVGTSRLSFRHSSRLNLHQDMKSPSMQSREMEDGDDHDDEILNEALTGRGELKLKAISFREERHAHAHVLHRDLNLKVKAVSFRDERHARAFQGLQVYPDEIIIETDS 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0579 726 Pfam HCO3- transporter family 25 199 IPR011531 GO:0006820|GO:0016020
Lele43g0579 726 Pfam HCO3- transporter family 472 563 IPR011531 GO:0006820|GO:0016020
Lele43g0579 726 Pfam HCO3- transporter family 221 394 IPR011531 GO:0006820|GO:0016020
Lele43g0579 726 Gene3D Helical hairpin bin 36 77 - -
Lele43g0579 726 PANTHER ANION EXCHANGE PROTEIN 21 620 IPR003020 GO:0005452|GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0579 Lele-ChrLele43 5209700 5218998 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0579 23 681 Antiporters AT1G74810 63.487 0.0 875
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele41g0818 41 17887775 17892799 Lele43g0579 43 5209700 5218998 hybridization
Lele42g0806 42 20947397 20954247 Lele43g0579 43 5209700 5218998 hybridization