Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0565 ATGCTGTCATGCTTGTTGAATGTTCATTATGAATGCATAGTCTACGTTAACTGTGTTCTTCCTCATTCAGAAACATGGACTAGGAAAAAGTTGCTTAGTGTTCACTGGATTTATGCATCTAGATTTAGTGTCTATGTTTTGCTAAATCTTGAGGACATGAAGAAAGAAAACATTGGCTCTTCAAAAGCTGCGCAGCTCCCTGGTCGCTTGACCCGTGCACGAGCTGCTGCCTTTCGTGCGAATGGACAGCTGCCACCTCTCAAGGAGCCAACCCAGCAAAATCAGAAGCCATTACGAGCTAACCCGAAAAGATCATCCTCTGATCAAACATGTCCTCAGCGTAAAAAGAGGGCTGTTCTTCAGGACGTTACCAATGTTTTCTGTGAAAATTCATATAGGAACTGGTTCAATGCTACTAAAATTCAGGCTAAGAAAAGCAAGCTGAGTAAAACTGGTCAAGTCAATATTTCCAGAGAAGTTCCTTCAGTTTCTGGGAAGCTACCACAGCTTCAAGTTGACTCAAAACCAAAGAGTTTACCTGAAACAGGACTTGTATCAGAAGATGCTAATGCTATCTGTTCGAGTAATTTGGGAGACAATGCTCTCCATCAGACAAGTGGCAACAAAGTGTGCAGCACAAATGATGGTCTGCTTGGAGGGCAGACTCCTGGATTATGTCCTCAGCCACTGATTTCTCAAACAAAAGCCAAGAGAATTAGCCTTTCTGAACTTCCAAGCGCATCAAAGAATGAAGATTTTTTTGATATAGATGCTGATCATGAAGATCCTCAATTATGCAGTGCCTATGCTTTTGATATCTACAACAATTTACGTATTTTCGAGCTCGCAAGAAGGCCTTGTACTAACTTTATGGAAACGGTTCAGCGAGATATCACTCAAAGCATGCGTGGGATATTAGTTGACTGGCTCGTAGAGGTTTCGGAGGAGTACAAGTTGGTTCCAGATACTCTATACCTGACCGTATATCTCATAGATTGGTTTCTCTCCAAAAATTACATTGAAAGACAAAAACTTCAGCTGTTTGGCATCACCTGCATGCTAATCGCTTCGAAGCTCGAAGAAATTTGTCCCCCGCGGATTGATGAATTCTGCTTCATCACAGACAACACCTACACAAAAGAGGAGGTACTTAAAATGGAGACTAAAGTGTTTAGGTGTTCCCAATTTCAAATGTTTGCTCCCACAACAAAAACTTTCCTCAGGAGGTTTCTTCGAGCAGCGCAAGCTTCTTACAAGAGTCCTAGCCTTGAATTGGAATACCTGGCCAATTATCTTGCTGAACTAAGCCTGATGGACTATAGTTTCTTGACTTTCCTTCCTTCTTTCATTGCTGCATCTGCTGTATTTCTAGCCAGATGGACATTAGATCAGAAATATCACCCTTGGAATCCAACTCTTGAACATTATTCAAGGTACAAGGCTTCAGATTTAAAAGCCACAATTTTTGCATTGCAAGATCTTCAACTGAATACCAAAGGCTGCCCTTTAAGCGCCATTCGGATGAAGTATAGACAAGACAAGTTCAAAAATGTGGCTGCCATGTCTTCGCCGAAACTGCTTGAAATTCTGTTCTGA 1596 0.416 MLSCLLNVHYECIVYVNCVLPHSETWTRKKLLSVHWIYASRFSVYVLLNLEDMKKENIGSSKAAQLPGRLTRARAAAFRANGQLPPLKEPTQQNQKPLRANPKRSSSDQTCPQRKKRAVLQDVTNVFCENSYRNWFNATKIQAKKSKLSKTGQVNISREVPSVSGKLPQLQVDSKPKSLPETGLVSEDANAICSSNLGDNALHQTSGNKVCSTNDGLLGGQTPGLCPQPLISQTKAKRISLSELPSASKNEDFFDIDADHEDPQLCSAYAFDIYNNLRIFELARRPCTNFMETVQRDITQSMRGILVDWLVEVSEEYKLVPDTLYLTVYLIDWFLSKNYIERQKLQLFGITCMLIASKLEEICPPRIDEFCFITDNTYTKEEVLKMETKVFRCSQFQMFAPTTKTFLRRFLRAAQASYKSPSLELEYLANYLAELSLMDYSFLTFLPSFIAASAVFLARWTLDQKYHPWNPTLEHYSRYKASDLKATIFALQDLQLNTKGCPLSAIRMKYRQDKFKNVAAMSSPKLLEILF 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0565 531 CDD CYCLIN 302 390 IPR013763 -
Lele43g0565 531 PIRSF Cyclin_A_B_D_E 74 529 IPR039361 -
Lele43g0565 531 FunFam Cyclin A1 388 520 - -
Lele43g0565 531 SMART Cyclin_C_2 401 524 IPR004367 -
Lele43g0565 531 PANTHER CYCLINS 233 485 IPR039361 -
Lele43g0565 531 CDD CYCLIN 401 479 IPR013763 -
Lele43g0565 531 Pfam Cyclin, N-terminal domain 272 396 IPR006671 -
Lele43g0565 531 Pfam Cyclin, C-terminal domain 401 523 IPR004367 -
Lele43g0565 531 Gene3D - 272 520 - -
Lele43g0565 531 SMART cyclin_7 405 493 IPR013763 -
Lele43g0565 531 SMART cyclin_7 308 392 IPR013763 -
Lele43g0565 531 SUPERFAMILY Cyclin-like 261 397 IPR036915 -
Lele43g0565 531 FunFam Mitotic cyclin 6 286 386 - -
Lele43g0565 531 MobiDBLite consensus disorder prediction 86 114 - -
Lele43g0565 531 Gene3D - 286 399 - -
Lele43g0565 531 MobiDBLite consensus disorder prediction 81 116 - -
Lele43g0565 531 SUPERFAMILY Cyclin-like 401 526 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0565 Lele-ChrLele43 5075399 5090037 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0565 53 531 Core Cell Cycle Gene Families AT1G80370 53.279 2.58e-165 475