Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0555 ATGACGTGGACAGACATCCTCGCACAAGTCTTCTCCGAATTCGCAGCACCTTTTCTGGGTTTCTTCAACTTCATTCTCCGTAGCAATCTCTTCCCCGCGACGATCCGACCGACCGACATCGATGAGCTCAACGCGGTTGACGAGCTATTGGAAGAGATATTAACACAATACTATGCACAGAAGGAACTGAGCAGGCAAAACACTGCTCAATTGCTCAAGGAACCGAAATTGGAAGAGAGAGCAAAACAAGAACAATGCAGTGTTTGTCTTGAATCTTTTCAATATAACGATGATGTTGTGGCAATGCCATGTAATCATATTTATCATAGTAAATGTATTGTTGAGTGGTTTCATAACGTTATATATGTTATAAACTATAAAGCTTACTTGCAGTATATGAAGTCAATTTGA 411 0.4039 MTWTDILAQVFSEFAAPFLGFFNFILRSNLFPATIRPTDIDELNAVDELLEEILTQYYAQKELSRQNTAQLLKEPKLEERAKQEQCSVCLESFQYNDDVVAMPCNHIYHSKCIVEWFHNVIYVINYKAYLQYMKSI 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0555 136 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 63 118 - -
Lele43g0555 136 Pfam RING-like zinc finger 85 113 IPR001841 -
Lele43g0555 136 ProSiteProfiles Zinc finger RING-type profile. 86 116 IPR001841 -
Lele43g0555 136 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 50 121 IPR013083 -
Lele43g0555 136 SUPERFAMILY RING/U-box 85 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0555 Lele-ChrLele43 5001003 5001584 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0555 54 117 C3H Transcription Factor Family AT3G58720 37.313 2.25e-08 49.3