Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0552 ATGGAGGAAAGCAACGATCGAAATTCTCCTTCAGTGAGGACAGGTGGCAGTTTTAAATCCACTTTGTCTGGAAGATCAACTCCACGATCCTCTCCGTCATTTCGGCGACTAAATTCTGGCAGAACACCAAGAAGAGAAGGCAGAAGTAGTTTTGCTGGTTCCCAGAGGTTTCGTGGCAATCGAGTACTGTTATGGTTGCTTCTCATTACCCTCTGGGCTTATCTTGGATTTCTTGTTCAGTCCAGGTGGGCACATAGTGATAAGAAGGATGAATTTTCGGGCTTTGGAATTGGAGGCAGGTTAAGTGATACAAACTCAGATGTTGAACAGAGTAGACGTCATGATTTGGTTGCTGGTGATAATTCCTTATCCCTTAATAATTACACAGTTAAACATGAGATGCAGGATGGGGAAAAAATGACCGTGGCTTTGGCCCAGAAAGAAGATAGTGTTCCATCTCCTCGCAAAACAAGCTCCAAGAAGAAGAGTAGACGATCACGATCTAGAGGTAAAGCACGTCGCAAGCTGAAACCAACAGTGGAAGTTGAGAAGAGAGACATAGAGGAGCAAGACTCAGAAATTCCTAAAAAGAATACTACCTATGGATTGCTTGTTGGTCCATTTGGCTTGACAGAGGATAAAATTCTGGAATGGAGTCCTGAGAAGCGTTCTGGAACCTGTAACAGGAAGGGAGACTTCGCACGTCTTGTTTGGTCCAGGAGATTTATCTTAATATTCCACGAGCTTTCTATGACTGGAGCTCCACTTTCTATGATGGAGTTGGCGACAGAGCTTTTGAGCTGTGGGGCTAGTGTCTCTGCTGTTGTGCTTAGCAGGAAGGGTGGCTTGTTGCCAGAGCTAACTAGGAGACGAATCAAGGTGCTTGAGGATAGAGCAGATAACAGCTTCAAAACTGCAATGAAGTCTGATCTAGTCATTGCTGGATCAGCTGTTTGTGCTTCATGGATCGAACAATATATTGAACGTTTTCCTGCTGGTGCAAGTCAAGTTGCTTGGTGGATTATGGAAAACCGACGAGAGTACTTTGATCGTTCAAAGGCTGTCCTGCACAGAGTAAAACTGCTGGTATTCCTCTCTGAGTTGCAATCTAAGCAATGGCAAAAGTGGTGTGAGGAAGAAAACATAAAACTGAGGTATCAGCCTGCACTGGTTCCATTGTCCGTGAATGATGAATTGGCTTTTGTAGCTGGCATTTCTTCTACACTTAATACCCCATCCTTTAGTGCTGAGAAAATGTTAGAGAAAAGGCAATTGTTAAGAGATGCAGTCCGAAAGGAAATGGGCTTGACTGATAATGATATGCTTGTGATGACTTTGAGTAGCATAAACCCAAGTAAGGGTCAGCTATTGCTTCTTGAATCAGCAAGCACGATAGTAGAACATGGACAGTTGCGAGATAGTAAGACCACGAAAAAATCATCAGATGTGGGAGAAGGCCTATCTACCCTGGCTAGGAGACATCATATTAGAAGTTTGATGCAATTGTTGAATGCTGACGACAGAGCTTTGCATGATATCTCAAGCATACCTTTGAACAGAAGGAAGGTGTTGTCAAACAATGAAAAACTGTTGGATCAATCTCTCAGAATTCTTATTGGTTCTGTTGGAAGTAAAAGCAACAAAGTGGATTATGTTAAAGGTCTTCTGACTTTCTTGTCTCAGCATTCAAACTTGTCAAAGTCAGTTTTGTGGACTCCATCAACAACACGTGTTGCCTCACTTTATTCTGCTGCGGATGTTTATGTCATAAATTCTCAGGGACTAGGAGAAACATTTGGGAGGGTGACTATTGAGGCAATGGCATTTGGTCTTCCGGTGCTTGGAACAGATTCTGGAGGAACACTAGAAATTGTTGAGCACAACGTTACAGGTCTTCTTCATCCTACTGGACGTCCAGGGATTCCTGTCCTCACGCAAAATCTACGGTTTTTACTTGAAAACCGGTCGGCAAGGGAACGAATGGGATTGGAGGGAAGAAAGAAGGTGCAAAGGATGTACTTGAAGAAGCATATGTACAAGAGTTTCGTAGAGGTTATCGTTAGGTGCATGAGAAGCAAATAA 2082 0.4318 MEESNDRNSPSVRTGGSFKSTLSGRSTPRSSPSFRRLNSGRTPRREGRSSFAGSQRFRGNRVLLWLLLITLWAYLGFLVQSRWAHSDKKDEFSGFGIGGRLSDTNSDVEQSRRHDLVAGDNSLSLNNYTVKHEMQDGEKMTVALAQKEDSVPSPRKTSSKKKSRRSRSRGKARRKLKPTVEVEKRDIEEQDSEIPKKNTTYGLLVGPFGLTEDKILEWSPEKRSGTCNRKGDFARLVWSRRFILIFHELSMTGAPLSMMELATELLSCGASVSAVVLSRKGGLLPELTRRRIKVLEDRADNSFKTAMKSDLVIAGSAVCASWIEQYIERFPAGASQVAWWIMENRREYFDRSKAVLHRVKLLVFLSELQSKQWQKWCEEENIKLRYQPALVPLSVNDELAFVAGISSTLNTPSFSAEKMLEKRQLLRDAVRKEMGLTDNDMLVMTLSSINPSKGQLLLLESASTIVEHGQLRDSKTTKKSSDVGEGLSTLARRHHIRSLMQLLNADDRALHDISSIPLNRRKVLSNNEKLLDQSLRILIGSVGSKSNKVDYVKGLLTFLSQHSNLSKSVLWTPSTTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGLPVLGTDSGGTLEIVEHNVTGLLHPTGRPGIPVLTQNLRFLLENRSARERMGLEGRKKVQRMYLKKHMYKSFVEVIVRCMRSK 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0552 693 PANTHER BNAA05G14870D PROTEIN 8 693 - -
Lele43g0552 693 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 246 685 - -
Lele43g0552 693 MobiDBLite consensus disorder prediction 144 188 - -
Lele43g0552 693 MobiDBLite consensus disorder prediction 8 52 - -
Lele43g0552 693 MobiDBLite consensus disorder prediction 157 174 - -
Lele43g0552 693 Pfam Glycosyl transferases group 1 558 667 IPR001296 GO:0016757
Lele43g0552 693 Pfam Glycosyl-transferase family 4 238 407 IPR041693 -
Lele43g0552 693 MobiDBLite consensus disorder prediction 1 52 - -
Lele43g0552 693 Gene3D Glycogen Phosphorylase B; 414 673 - -
Lele43g0552 693 MobiDBLite consensus disorder prediction 94 115 - -
Lele43g0552 693 CDD GT4_PimA-like 243 686 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0552 Lele-ChrLele43 4977148 4981068 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0552 16 691 Glycosyltransferase AT3G15940 61.426 0.0 810
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele38g0388 38 3143368 3148918 Lele43g0552 43 4977148 4981068 CCT
Lele39g1015 39 18860814 18864776 Lele43g0552 43 4977148 4981068 CCT
Lele40g0367 40 3001708 3003100 Lele43g0552 43 4977148 4981068 CCT
Lele41g0841 41 18120074 18124021 Lele43g0552 43 4977148 4981068 hybridization
Lele42g0830 42 21215752 21219719 Lele43g0552 43 4977148 4981068 hybridization