Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0546 ATGGGTCTCAATTCAAACCGGGTCGATCACTTCGATTCTCGCCACTCAACTGTCGTCAAAATCCAAACCGATATTCCTTCAGTGGAAATCCACCCGGTTCGCCTCCCTCCTGAGCAAACCACTCTCCAGAAGCTCAAGCGTAGGCTCTCTGAGATCTTCTTCCCCGATGACCCTCTTCATGGCTTCAAGAACCAAACCCGGTTGACCAAACTCATTCTGGCTCTTCAGTATCTCTTCCCCATTTTCCAGTGGGCCCCTTACTACTCCCTCAAACTCCTCCGTTCTGATGTCATCTCTGGCCTCACCATTGCCAGCCTTGCCATTCCTCAGGGAATAAGCTATGCAAAGCTTGCAAATTTGCCACCTATAATCGGACTATATTCAAGTTTTGTGCCGCCATTGATATACTCTCTGCTTGGGAGTTCTAGGCATCTTGGGGTTGGTCCTGTGTCCATAGCCTCTCTGGTTATGGGGTCAATGTTAAGCGAATCAGTTTCTAACGTTTCAGATCCAATCCTCTACCTCAAACTCGCTTTCACTGCCACCTTCTTCGCTGGTGTATTCCAATCTTCTCTTGGCTTTCTTAGGTATTCATTCCATTTCTTGCCTACTCTGTTTTATGTTGAAACCTACGAAAAAATTTACGCAACGCTGGTGGGTTTCATGGCAGGGGCAGCCATTATAGTGTCTCTGCAACAGCTAAAAGGCTTACTGGGAATAACTCACTTCACTTCCAAGATGCAAATGATTCCTGTTATGTCCTCTGTTTTTAATCGGAGAGATGAAATTGGACACTTACCAAAAGGCCTTAATCCACCATCAACGAACATGTTGGTCTTCACTGGTCCTCACTTGGCACTTGCAATCAAAACTGGCATCATCACTGGGATTCTATCTCTTACTGAAGGAATTGCAGTAGGAAGAACATTTGGAGCACTTAAGAACTACCAAGTGGATGGAAACAAAGAAATGATGGCCATTGGTCTGATGAACATAGCTGGCTGTTGTTCTTCATGCTATGTCACCACAGGATCATTTTCTCGATCGGCTGTCAACTACAACGCCGGAGCACAAACAGCTGTCTCAAACATAATAATGGCTGCAGCCGTTCTTGTGACCCTTCTGTTTCTCATGCCTCTGTTCTATTACACACCAAACTTCATCCTGGCAGCCATTATCATCACTGCTGTTATAGGACTGATAGATTATCAAGCTGCATATAAACTGTGGAAAGTCGACAAGCTTGATTTCTTGGCTTGTTTGTGCTCTTTCTTTGGTGTTCTGTTCATCTCAGTGCCCCTAGGCCTTGGTATTGCGGTTTCAATTTCAGTCTTCAAGATTCTGCTTCATGTGTCTCGGCCGAACACTCTAGTGTTGGGGAACATACCAGGAACACAAATATACCACAACCTAAATAGATACAGAGAAGCTCTGAGGGTTCCTTCATTTCTCATTTTGGCTGTTGAATCTCCCCTCTACTTTGCTAATTCAACATACTTGCAAGAAAGGATACTGAGATGGGTCCGAGAAGAGGAAGAGCGCATAAAAGCAAACAATGAAAGTGCATTGAAGTGCATAATTCTAGATATGACAGCTGTGACAGCCATAGACACGAGTGGAATTGACACATTACGCGAAATTAGAAAGATTCTGGAAAAAAGATCATTTCAGCTTGTGTTGACAAATCCTGCAGGGACTGTGATGGAAAAGTTGCATCAGTCAAATATCTTGGATTCCTTTGGGCAAAAAGGACTCTATCTCACAGTGGGAGAAGCTGTGGCTGACATTTCTTTGTCCTAG 1800 0.4433 MGLNSNRVDHFDSRHSTVVKIQTDIPSVEIHPVRLPPEQTTLQKLKRRLSEIFFPDDPLHGFKNQTRLTKLILALQYLFPIFQWAPYYSLKLLRSDVISGLTIASLAIPQGISYAKLANLPPIIGLYSSFVPPLIYSLLGSSRHLGVGPVSIASLVMGSMLSESVSNVSDPILYLKLAFTATFFAGVFQSSLGFLRYSFHFLPTLFYVETYEKIYATLVGFMAGAAIIVSLQQLKGLLGITHFTSKMQMIPVMSSVFNRRDEIGHLPKGLNPPSTNMLVFTGPHLALAIKTGIITGILSLTEGIAVGRTFGALKNYQVDGNKEMMAIGLMNIAGCCSSCYVTTGSFSRSAVNYNAGAQTAVSNIIMAAAVLVTLLFLMPLFYYTPNFILAAIIITAVIGLIDYQAAYKLWKVDKLDFLACLCSFFGVLFISVPLGLGIAVSISVFKILLHVSRPNTLVLGNIPGTQIYHNLNRYREALRVPSFLILAVESPLYFANSTYLQERILRWVREEEERIKANNESALKCIILDMTAVTAIDTSGIDTLREIRKILEKRSFQLVLTNPAGTVMEKLHQSNILDSFGQKGLYLTVGEAVADISLS 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0546 599 Pfam Sulfate permease family 93 260 IPR011547 GO:0016020
Lele43g0546 599 Pfam Sulfate permease family 263 421 IPR011547 GO:0016020
Lele43g0546 599 SUPERFAMILY SpoIIaa-like 478 594 IPR036513 -
Lele43g0546 599 Gene3D STAS domain 453 597 IPR036513 -
Lele43g0546 599 Pfam STAS domain 474 592 IPR002645 -
Lele43g0546 599 ProSiteProfiles STAS domain profile. 473 596 IPR002645 -
Lele43g0546 599 ProSitePatterns SLC26A transporters signature. 122 143 IPR018045 GO:0008271|GO:0008272
Lele43g0546 599 FunFam Sulfate transporter 31 453 599 - -
Lele43g0546 599 CDD STAS_SulP_like_sulfate_transporter 474 589 - -
Lele43g0546 599 PANTHER SULFATE TRANSPORTER 263 595 IPR001902 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0546 Lele-ChrLele43 4919949 4924796 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0546 29 594 Inorganic Solute Cotransporters AT4G02700 48.963 0.0 572
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele41g0846 41 18175023 18179842 Lele43g0546 43 4919949 4924796 hybridization
Lele42g0836 42 21269331 21273794 Lele43g0546 43 4919949 4924796 hybridization