Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0530 ATGGTATTTCAAATCTACGCAGTTTTCTCAAGAGCATTATGTGACTCATCAGTCTCAACCACCGACCCTCCGTCGTACAAGGGCGTGGCTCTCAGCGGATTCACCACCGGAGCCGTACAAAGTCTCCTCCTTTCACCAGTAGAACTAGTCAAAATTCGTCTTCAGCTCCAAAACGCAGGCAAAGTTACAGAATCTCATTACAAGGGTCCCTCACAAGTGGCCCAGACCATATGGAAGAAAGAAGGACTCAAGGGAATTTACAGAGGTTTAGGAATCACCGTGCTCAGAGACGCACCTTCCCATGGCTTCTACTTCTGGACATACGAATACATGAGAGAACAACTTCACCCAGGTTGCAGAAAAAGTGAGCAAGAAAGCTTGAACACCATGTTAATGGCGGGAGGTTTAGCTGGAGTAGCAAGCTGGGTTTGTTGTTATCCTTTGGATGTTATAAAGACGAGACTTCAAGCTCAAACACCATCTTCAGTGAAGTACAGAGGCATTTTGGATTGTCTGAGAAAGAGTGTGAAAGAAGAAGGTTACTCTGTGTTATGGCGAGGTTTAGGAACTGCTGTTGCAAGAGCATTTGTGGTGAATGGGGCAATTTTCTCTGCTTATGAGATTGCTCTGAGGATTTTGTTCAACAATGGAAGTATTCAAATCGAAGAAACTGTGTGA 678 0.4469 MVFQIYAVFSRALCDSSVSTTDPPSYKGVALSGFTTGAVQSLLLSPVELVKIRLQLQNAGKVTESHYKGPSQVAQTIWKKEGLKGIYRGLGITVLRDAPSHGFYFWTYEYMREQLHPGCRKSEQESLNTMLMAGGLAGVASWVCCYPLDVIKTRLQAQTPSSVKYRGILDCLRKSVKEEGYSVLWRGLGTAVARAFVVNGAIFSAYEIALRILFNNGSIQIEETV 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0530 225 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 2 213 - -
Lele43g0530 225 ProSiteProfiles Solute carrier (Solcar) repeat profile. 24 114 IPR018108 -
Lele43g0530 225 SUPERFAMILY Mitochondrial carrier 3 207 IPR023395 -
Lele43g0530 225 ProSiteProfiles Solute carrier (Solcar) repeat profile. 125 212 IPR018108 -
Lele43g0530 225 Gene3D Mitochondrial carrier domain 1 221 IPR023395 -
Lele43g0530 225 PRINTS Mitochondrial carrier protein signature 140 158 IPR002067 GO:0055085
Lele43g0530 225 PRINTS Mitochondrial carrier protein signature 89 109 IPR002067 GO:0055085
Lele43g0530 225 PRINTS Mitochondrial carrier protein signature 185 203 IPR002067 GO:0055085
Lele43g0530 225 PRINTS Mitochondrial carrier protein signature 42 56 IPR002067 GO:0055085
Lele43g0530 225 Pfam Mitochondrial carrier protein 30 115 IPR018108 -
Lele43g0530 225 Pfam Mitochondrial carrier protein 129 216 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0530 Lele-ChrLele43 4796583 4797260 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0530 1 216 Antiporters AT1G79900 70.833 3.16e-107 309