Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0529 ATGAACGGAGGAGGGAGGCAGGGACAGAGATCTGGTGCGAAGGGGGTGCACCACCAGCGCCAGTACTCGGATAACTTTCTGGACAGCTCATCCAATGGGAGGTGGCTCCAGTCGGCTGGTCTTCAACACCTTCAATCCTCCGGCAATCCCATTCCTCCACTTCAGGACTATAACTTCTATGGTGGAGGAGGGCAGGGAGCTAGAATGTTCAGGAATCCGCAAAGGAGCTTTAATGGGGGAAGTGAGTATTACACAGAACCGTCCACACCGCCTGGCAATCACCGGTCTTCAAATCAGAGGAAGAATGGTGAAGATTCACCTGGTGATTTCAGCCCCGGACTTTTGGATCTGCATTCGTTTGATACACAGCTTCTTCCTGAGGGTAGAAGCTTTGATGACTCCGAACCTCCCATTTCAAACAAACAGACTGGTAGAGCTCATGCTCCGGAAAACAGCCTCCTCAAAAGTTTTTCTGCAGACAAAGATAAATATAGTTCTGTAGCAAAGATTAAAGTTGTGGTGCGCAAAAGACCATTGAATAAGAAGGAGCTAACAAAGAATGAGGAAGATATTATAGACACGCACTCCAATTCTTTAACGGTGCATGAAACTAAACTTAAGGTTGACTTAACTCAATATTTAGAAAAGCACGAATTTGTTTTTGATGCTGTCTTGAACGAAGAGGTTACGAATGATGAGGTTTATAGTGAAACAGTGGAGCCCATAGTTCCAATAATCTTTCAACGAACGAAGGCAACTTGCTTTGCTTATGGCCAAACAGGCAGTGGAAAAACTTACACAATGAAGCCACTTCCGCTTAAGGCATCAAGGGACATCTTGAGATTGATGCACCATGCTTACAGGAACCAGGGATTTCAGTTGTTTGTGAGTTTCTTTGAAATATATGGTGGGAAGCTTTTTGACCTCCTTAATGATCGAAAAAAACTTTGCATGAGGGAGGATGGTAAGCAGCAAGTTTGCATTGTGGGTTTGCAAGAATACAGAGTATCAGATGTGGAGACCATCAAGGAGTTGATTGAGAAAGGAAATGCCACAAGAAGTACTGGCACCACAGGTGCGAATGAGGAATCTTCTCGATCACATGCAATACTTCAGCTTGCCGTCAAGAGGTTAGTTGATGGTAATGCATCCAAGCCTCCCCGTGCTGTTGGCAAACTCTCCTTCATAGATCTTGCTGGAAGTGAACGTGGAGCTGATACCACAGACAATGACAAACAGACAAGAATTGAAGGTGCTGAGATCAATAAGAGCTTACTTGCCTTGAAGGAGTGCATAAGAGCTCTAGATAATGACCAGGGACACATCCCTTTCAGAGGAAGCAAATTGACTGAGGTTTTGAGGGATTCATTTGTTGGCAACTCACGCACTGTTATGATTTCATGCATATCACCAGGCTCTGGTTCATGTGAACATACGCTTAACACATTAAGATATGCTGACAGGGTGAAAAGCCTGTCAAAAGGGAACAACCCTAAGAAGGAAGCTTTATCTTCAAATTTAAACCCCAAACAATCAGCTACCATGCCTTTATCTGCGGTTGCTGCCTCCACCTTTGAGGACCGTGCGGCAGATGCATGGCCTGAAGGAAATGAGGATGATGAATTTAGTCCGACTGAAGAGTACTATGAGCAGGGGAAACCTTCTTGGAAGAAAAATGGGAATATAGAATCTTACAGTACCGCTGAGGACAAGATAAAGGAACCCAATGGTCAGATCAAATATAAAGACATGCCAAAAGTTGAATACGCTACACATTCGGATGATGATTTAAATGCCCTCCTACAGGAAGAGGAGGACCTCGTAAATGCTCACAGGAAACAAGTAGAGGATACCATGAAAATTGTCAGAGAGGAAATGAATCTCTTGGTTGAAGCAGATCAACCAGGCAATCAATTAGATGGTTATGTAACAAGATTAAACGCCATTCTATCTCAGAAGGCTGCCAGTATCCTGCACTTACAAAATCGTTTAGCTCACTTCCAGAAACGCTTAAAGGAGCATAATGTTTTGGTTTCCTCTGCTGGTTACTAA 2052 0.4386 MNGGGRQGQRSGAKGVHHQRQYSDNFLDSSSNGRWLQSAGLQHLQSSGNPIPPLQDYNFYGGGGQGARMFRNPQRSFNGGSEYYTEPSTPPGNHRSSNQRKNGEDSPGDFSPGLLDLHSFDTQLLPEGRSFDDSEPPISNKQTGRAHAPENSLLKSFSADKDKYSSVAKIKVVVRKRPLNKKELTKNEEDIIDTHSNSLTVHETKLKVDLTQYLEKHEFVFDAVLNEEVTNDEVYSETVEPIVPIIFQRTKATCFAYGQTGSGKTYTMKPLPLKASRDILRLMHHAYRNQGFQLFVSFFEIYGGKLFDLLNDRKKLCMREDGKQQVCIVGLQEYRVSDVETIKELIEKGNATRSTGTTGANEESSRSHAILQLAVKRLVDGNASKPPRAVGKLSFIDLAGSERGADTTDNDKQTRIEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVGNSRTVMISCISPGSGSCEHTLNTLRYADRVKSLSKGNNPKKEALSSNLNPKQSATMPLSAVAASTFEDRAADAWPEGNEDDEFSPTEEYYEQGKPSWKKNGNIESYSTAEDKIKEPNGQIKYKDMPKVEYATHSDDDLNALLQEEEDLVNAHRKQVEDTMKIVREEMNLLVEADQPGNQLDGYVTRLNAILSQKAASILHLQNRLAHFQKRLKEHNVLVSSAGY 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0529 683 Pfam Kinesin motor domain 175 491 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele43g0529 683 ProSitePatterns Kinesin motor domain signature. 391 402 IPR019821 GO:0003777|GO:0005524|GO:0007018
Lele43g0529 683 MobiDBLite consensus disorder prediction 1 151 - -
Lele43g0529 683 MobiDBLite consensus disorder prediction 497 513 - -
Lele43g0529 683 MobiDBLite consensus disorder prediction 14 53 - -
Lele43g0529 683 MobiDBLite consensus disorder prediction 135 149 - -
Lele43g0529 683 Gene3D Kinesin motor domain 149 495 IPR036961 -
Lele43g0529 683 PRINTS Kinesin heavy chain signature 249 270 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele43g0529 683 PRINTS Kinesin heavy chain signature 358 375 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele43g0529 683 PRINTS Kinesin heavy chain signature 392 410 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele43g0529 683 PRINTS Kinesin heavy chain signature 442 463 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele43g0529 683 CDD KISc_KIF2_like 169 490 - -
Lele43g0529 683 ProSiteProfiles Kinesin motor domain profile. 169 492 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele43g0529 683 MobiDBLite consensus disorder prediction 71 97 - -
Lele43g0529 683 MobiDBLite consensus disorder prediction 533 555 - -
Lele43g0529 683 FunFam Kinesin-like protein 150 495 - -
Lele43g0529 683 SMART kinesin_4 167 498 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele43g0529 683 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 164 492 IPR027417 -
Lele43g0529 683 MobiDBLite consensus disorder prediction 492 513 - -
Lele43g0529 683 PANTHER KINESIN-RELATED PROTEIN 6 30 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0529 Lele-ChrLele43 4788325 4793094 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0529 169 500 Calmodulin-binding Proteins AT5G65930 34.503 5.91e-44 168