Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0527 ATGAGCAGTTCGGCTCAGAACTTCAACCCTAAACCGCCATTTTTCTTTTGCTCGTATAAAGCCTATCCTGAACGCCGCTCCTTGTTCTTCCATACTTCCTCGGCTGAAGCTGAATCTAGGGGGAAGGGAACAGGAAGCTTTGGGAAGAGGAGGAATAAGACCCACACTCTCTGTGTGAGGTGTGGCCGTCGCAGCTTTCACCTCCAGAAGAGTCGCTGTGCGGCATGTGCTTACCCTGCTGCTCGCAAGAGGAAATATAACTGGAGTGTCAAGGCAATCCGCCGAAAGACAACCGGAACTGGTAGGATGAGGTACTTGCGTAATGTGCCTCGCAGGTTCAAGAGCGGTTTCAGAGAGGGTACTGAAGCCGCACCAAGGAAGAAGGGAGCAGTTGCCACAGCTTAA 405 0.521 MSSSAQNFNPKPPFFFCSYKAYPERRSLFFHTSSAEAESRGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAYPAARKRKYNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFREGTEAAPRKKGAVATA 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0527 134 FunFam Ribosomal protein L37 40 127 - -
Lele43g0527 134 Pfam Ribosomal protein L37e 42 92 IPR001569 GO:0003735|GO:0005840|GO:0006412
Lele43g0527 134 ProSitePatterns Ribosomal protein L37e signature. 43 62 IPR018267 GO:0003735|GO:0005840|GO:0006412
Lele43g0527 134 PANTHER 60S RIBOSOMAL PROTEIN L37 41 132 - -
Lele43g0527 134 Gene3D - 41 126 IPR011331 GO:0003735|GO:0005840|GO:0006412
Lele43g0527 134 SUPERFAMILY Zn-binding ribosomal proteins 41 94 IPR011332 GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0527 Lele-ChrLele43 4783180 4784073 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0527 42 134 Cytoplasmic Ribosomal Protein Gene Family AT1G52300 88.172 3.06e-57 171