Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0518 ATGATCATGGCCGGAAACCCTAACTGGTGGAGCATGCATCCACCAACTTTGATCCCTCCTCAGTTTGTTCTTGGATCTTCCTCAATTCCCATGAATTTCTTCACTGAAACCCAAGAAACTCCTCAGTCATGGAGCCAGATGCTTTTCGCAGGGTTGCCTGGAGAAGAAGAGAGAATGGGGTCGTCGAGTCATTTTGATGAAAGCAAGAAGATGGAAAATTGGGAAGAAAAGATTAATAATAACAATCCATCTTGTAGAGCATCATCAGTTCCACCTTCTATTGTTGATGTAATGAAGCAAGAAGCTTCCCAAAGTGGCAATAACTTGTACGGCCATGGAAGTGACGAGTTCCATCATCAGGCTTCAGGATCTTATACTTGGTTAAACAATATGATGCCTCCACCAGTAATTCCTTTCACTAATATTTCTTCCCCTAATAATAAGTCTCGTACTAGTAACACTAATATTTTGGATTTCACTTATAACAACAAGCGAGATCATAACCATAGTAATCAACTCCAGCATAACCCTTCATCATCTCAGAGTAATAATAGCTCAGTTTCTTCTGGAGTCTGTAACAAGAAGGCTAGGGTTCAGGCATCTTCAAGCCAGCCTCCTCTCAAGGTGAGAAAGGAGAAACTCGGGGATAGAATAACAGCGCTTCACCAGCTAGTTTCCCCATTTGGAAAGACTGACACAGCTTCTGTCTTGTTAGAAGCCATTGGATATATTAGATTCCTCCAAGGTCAAATTGAGGCACTAAGCTCGCCTTACTTATCGAATGCATCAAAGAACATTAGGAATCAACAGCACTCTGTACATGGAGAAAGGAATTCTGTGTTCCCTGAGGACCCGGGTCAGCTGTTGAATGACACTGGCCTCAAAAGAAAAGGAGCTCCAACCCAGGAAGGAGAAGGAAAGGCAAAGGACTTGAGGAGTAGAGGGCTATGCTTGGTGCCAGTGTCTTGCACTCAGCATGTTGGCAATGAAAATGGAGTTGATTACTGGGCACCTGCTTATGCCACCGGTTTTTAA 1035 0.4329 MIMAGNPNWWSMHPPTLIPPQFVLGSSSIPMNFFTETQETPQSWSQMLFAGLPGEEERMGSSSHFDESKKMENWEEKINNNNPSCRASSVPPSIVDVMKQEASQSGNNLYGHGSDEFHHQASGSYTWLNNMMPPPVIPFTNISSPNNKSRTSNTNILDFTYNNKRDHNHSNQLQHNPSSSQSNNSSVSSGVCNKKARVQASSSQPPLKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQGQIEALSSPYLSNASKNIRNQQHSVHGERNSVFPEDPGQLLNDTGLKRKGAPTQEGEGKAKDLRSRGLCLVPVSCTQHVGNENGVDYWAPAYATGF 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0518 344 MobiDBLite consensus disorder prediction 271 308 - -
Lele43g0518 344 CDD bHLH_AtbHLH_like 208 255 IPR045239 -
Lele43g0518 344 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 66 326 - -
Lele43g0518 344 MobiDBLite consensus disorder prediction 172 206 - -
Lele43g0518 344 Gene3D - 208 273 IPR036638 GO:0046983
Lele43g0518 344 MobiDBLite consensus disorder prediction 161 209 - -
Lele43g0518 344 FunFam Transcription factor bHLH123 family 208 271 - -
Lele43g0518 344 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 198 247 IPR011598 GO:0046983
Lele43g0518 344 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 208 259 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0518 Lele-ChrLele43 4694624 4698821 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0518 54 288 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 44.569 6.52e-41 145