Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0507 ATGGCGGCATCCCATTTGAGCCTTCTCTGCACTCTCACGACCATCTTGTTGGTTTCCTCCATGAATGATTCAGTCGAATCTGCAACACAATTCAAAGTCGGTGACGCCTTCGGTTGGCAACAGCCTCCCCCTAACAACACTGCATTTTACACCCACTGGGCTGCAATCAACAGATTCCATGTTTCAGATTCTCTTGTGTTTGAGTACAAGAATGACTCAGTTGTGAGTGTGGACAAATGGGACTATTATCACTGTGACGCGAGCGATCCAATCACCATCTTCAACAATGGGAATAGCACTATCAACATGGAGCAGCCTGGTTCATTTTACTTCATCAGTGGGATTTATGAACATTGCATGAATGGCCAGAAATTGATGCTTCAAGTCATATCTCCAATGTCTGCTTCTGCCCCTTCACCTTCTTCTCATCACCATCATAGCTCTGCGCCTTCATCATCACTTTCAGTGCTTCGATCTCTCAGCACTTGCTTTTCCTTCCTGTTCTTCATTATTGCTTCAGGTGTCTCTTCTGTCTAG 537 0.4525 MAASHLSLLCTLTTILLVSSMNDSVESATQFKVGDAFGWQQPPPNNTAFYTHWAAINRFHVSDSLVFEYKNDSVVSVDKWDYYHCDASDPITIFNNGNSTINMEQPGSFYFISGIYEHCMNGQKLMLQVISPMSASAPSPSSHHHHSSAPSSSLSVLRSLSTCFSFLFFIIASGVSSV 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0507 178 Gene3D - 27 134 IPR008972 -
Lele43g0507 178 FunFam Early nodulin-like protein 1 28 134 - -
Lele43g0507 178 ProSiteProfiles Phytocyanin domain profile. 29 131 IPR003245 GO:0009055
Lele43g0507 178 PANTHER BLUE COPPER PROTEIN 28 140 IPR039391 GO:0009055
Lele43g0507 178 Pfam Plastocyanin-like domain 46 123 IPR003245 GO:0009055
Lele43g0507 178 SUPERFAMILY Cupredoxins 28 130 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0507 Lele-ChrLele43 4611157 4611805 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0507 10 157 Phytocyanin Superfamily AT1G79800 46.358 1.17e-46 149
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele41g0897 41 18508118 18508909 Lele43g0507 43 4611157 4611805 hybridization
Lele42g0882 42 21575861 21576506 Lele43g0507 43 4611157 4611805 hybridization