Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0496 ATGGCAACAGCAACATATCCGCCGCCGCCACCCTATTACAGACTCTACAAAGATTATTTACAAGACCCTAAATCAGCTCCAGAACCTCCCCCTCCTATAGAAGGGACTTATGTTTGTTTTGGAGGCAATTATACAAGTGATGACACTCTACCAAGTTTGGAAGAGCAGGGAGTGCGCCAACTCTATCCTAAGGGCCCTGATGTTGATTACAAGAAGGAGCTGAGATCACTTAACGGAGACTTGCAGCTTCACATTTTGGAGCTTGCTGATATTCTCATTGAGAGACCATCACAATATGCAAGGAGAGTAGAAGAAATATCTCTCGTATTCAAGAACTTGCATCACCTTTTGAATTCACTGCGCCCTCATCAGGCAAGAGCAACATTGATTCACATTTTAGAACTTCAAATACAGCGACGTAAACAAGCAGTAGAGGACATAAAGAGAAGGAGAGAGGAAGCACGGAGACTTCTTAATGAGGCCGTAGCAACACTAGATGGCAATTAG 507 0.4379 MATATYPPPPPYYRLYKDYLQDPKSAPEPPPPIEGTYVCFGGNYTSDDTLPSLEEQGVRQLYPKGPDVDYKKELRSLNGDLQLHILELADILIERPSQYARRVEEISLVFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIKRRREEARRLLNEAVATLDGN 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0496 168 SUPERFAMILY Mediator hinge subcomplex-like 67 159 IPR037212 GO:0016592
Lele43g0496 168 Pfam MED7 protein 4 158 IPR009244 GO:0003712|GO:0006357|GO:0016592
Lele43g0496 168 Gene3D - 63 159 IPR044888 -
Lele43g0496 168 Coils Coil 130 164 - -
Lele43g0496 168 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 7 2 167 IPR009244 GO:0003712|GO:0006357|GO:0016592
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0496 Lele-ChrLele43 4508370 4510212 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MED7 Lele43g0496 Med7 2e-42 No_clan