Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0495 ATGACGCGGCGGTGCTCTCACTGCAGCCATAACGGGCACAACTCCCGAACTTGTCCGTCCCGTGGTGGAGGTGCCGGCGGCGGAAGCGCTGGAGGTGTGAAGCTATTCGGTGTTAGACTCACCGATGGACCAATCATTAAAAAGAGCGCTAGCATGGGTAATCTCTCCGCCCATTACTATTCTTCTTCGACCGCCGCCGGATCACCACATCCCGGGTCGCCGTGCTCTGACCCGCTCCGAGACCTGGGTCATGAGCAAGACGGGTGCTTGTCCGATGATCCCTCTCATGCCTCCAGCTCCGCGAACCGTCGTGGAGAAAGAAAGAAAGGTGTTCCATGGACTGAAGAAGAACATAAGATGTTTTTAATTGGTCTCCAGAAGCTGGGTAAAGGAGATTGGCGAGGCATATCTCGCAATTTTGTTGTGTCAAGGACTCCTACTCAAGTAGCAAGTCATGCCCAAAAGTACTTTATCCGGCAGAGCAACGCTACCCGGAGAAAAAGGCGTGCCAGTCTTTTTGACATGAATCCAGATGTGGCTTCAGATCCACCTTCAGTGCCAGAAGAACAAGTATTACTGCCACCTTCTGAGAACTCACAACCTTGTAGTGCAAATTTACAACCATCATTAGATCTCTCCCGCAAGTCAGAATTTGAACCCATGGAAACTAATTGTGAAGAAAATGTGGAAGAGCCCAATGAAACTATGGTAAGATCAAATGGATTGACACCAGTGGCTAACGGATTCATGCCAACGTATGTACCTGTTGCATTTTCCTTATGGCCATCAAATGCTGCTACCTTTGAAGAAGTTAAGGAAGCTGAGACAGCTCATCATCAGGTCCTTAAGCCAATCCCAGTCGTTCCTAAGGAACCAGTCAATGTTGATGAACTTGTTGGCATGTCTCAGCTTAGTTTGGGGGAAACACGAAAGGGTGATAGAGGGCCTTCCCCACTTTCTTTGAAGTTGCAGGGGGAGCCCTCAAGGCAATCAGCATTCCATGCAAATGCACCTGTTGGTGGTTCAGATTTAAACAATGGCAAGAACAGTGCAATTCAAGCAGCTTAA 1068 0.4888 MTRRCSHCSHNGHNSRTCPSRGGGAGGGSAGGVKLFGVRLTDGPIIKKSASMGNLSAHYYSSSTAAGSPHPGSPCSDPLRDLGHEQDGCLSDDPSHASSSANRRGERKKGVPWTEEEHKMFLIGLQKLGKGDWRGISRNFVVSRTPTQVASHAQKYFIRQSNATRRKRRASLFDMNPDVASDPPSVPEEQVLLPPSENSQPCSANLQPSLDLSRKSEFEPMETNCEENVEEPNETMVRSNGLTPVANGFMPTYVPVAFSLWPSNAATFEEVKEAETAHHQVLKPIPVVPKEPVNVDELVGMSQLSLGETRKGDRGPSPLSLKLQGEPSRQSAFHANAPVGGSDLNNGKNSAIQAA 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0495 355 MobiDBLite consensus disorder prediction 1 28 - -
Lele43g0495 355 FunFam transcription factor MYB1R1 111 162 - -
Lele43g0495 355 Gene3D - 113 162 - -
Lele43g0495 355 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 108 160 IPR006447 GO:0003677
Lele43g0495 355 PANTHER TRANSCRIPTION FACTOR KUA1 3 286 - -
Lele43g0495 355 SMART sant 109 159 IPR001005 -
Lele43g0495 355 MobiDBLite consensus disorder prediction 61 112 - -
Lele43g0495 355 MobiDBLite consensus disorder prediction 175 203 - -
Lele43g0495 355 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 105 161 IPR017930 -
Lele43g0495 355 SUPERFAMILY Homeodomain-like 107 162 IPR009057 -
Lele43g0495 355 ProSiteProfiles Myb-like domain profile. 105 157 IPR001005 -
Lele43g0495 355 MobiDBLite consensus disorder prediction 306 355 - -
Lele43g0495 355 CDD SANT 112 157 IPR001005 -
Lele43g0495 355 Pfam Myb-like DNA-binding domain 112 157 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0495 Lele-ChrLele43 4497135 4500205 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele43g0495 Myb_DNA-binding 1.8e-10 CL0123