Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0491 ATGAATGGTAGGTCAAGAAACGAGGAGGTGTCTCCTCAGCTGCTGGATTTGATCCCAACAGAACGAGAGTGGCATGAAAACAGAGATGAAGAGAGGAAACTTGAGCTTAGACTTGGTCCACCTGGTGAAGAAGACGAATCTCTATTCTCTGTTGGTTACTTCCCATCCTCCATTAATGGAGGCCACACCCAGAAAACTGTGTCTTCTTCTCCTTGGGCTTCTTCTTCAGCAGGCTACCAGGAGAAGAAGACTCAGAACATTAATCAACACAAGGGAGTTTCATCATCATTCCTACAACAGGCTCAACCCTCTTCTGCAAATACAGCTGTACCCAACAGCTCTCAGAAAAGAACTGCTCCTGGTCCAGTAGTGGGTTGGCCTCCAATTCGTTCATTTAGGAAGAACCTTGCAAGCAGTAGCTCGTCTAAGGTTGTTCTTCAACATGAATCTCAGTATCAGAATCATGTAGTTGAAGATAAGGTTGCTGGGAAGAAACCTGTGGCTGACAACAACAACGTTGTTGTTGATGGTAATAAAGGCCTGTTTGTGAAGATCAACATGGATGGAGTTCCCATAGGCAGAAAAGTGGACCTTAATGCTTACGATAGCTATGAAAAACTCTCCTCTGCTGTTGATGAACTCTTTAGAGGCCTCCTTGCTGCTCAAAGAGATTCCTCCGGTGGTGGTGGGATTCAGAACAAACCAGAAGATGAGAAAGCCATCACAGGTTTATTGGATGGAAGTAGAGAATACACTCTGGTTTATGAGGATAATGAAGGAGACAGGATGCTTGTTGGGGATGTGCCATGGCACATGTTCGTGTCAACAGTGAGGAGGCTGCGTGTTCTGAAGAGCTCCGAGCTCTCTGCTTTTACTCGTGAGTTCTGA 888 0.4561 MNGRSRNEEVSPQLLDLIPTEREWHENRDEERKLELRLGPPGEEDESLFSVGYFPSSINGGHTQKTVSSSPWASSSAGYQEKKTQNINQHKGVSSSFLQQAQPSSANTAVPNSSQKRTAPGPVVGWPPIRSFRKNLASSSSSKVVLQHESQYQNHVVEDKVAGKKPVADNNNVVVDGNKGLFVKINMDGVPIGRKVDLNAYDSYEKLSSAVDELFRGLLAAQRDSSGGGGIQNKPEDEKAITGLLDGSREYTLVYEDNEGDRMLVGDVPWHMFVSTVRRLRVLKSSELSAFTREF 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0491 295 MobiDBLite consensus disorder prediction 19 42 - -
Lele43g0491 295 Pfam AUX/IAA family 34 290 IPR033389 -
Lele43g0491 295 ProSiteProfiles PB1 domain profile. 180 285 IPR000270 GO:0005515
Lele43g0491 295 MobiDBLite consensus disorder prediction 1 126 - -
Lele43g0491 295 SUPERFAMILY CAD & PB1 domains 178 282 - -
Lele43g0491 295 Gene3D - 175 294 - -
Lele43g0491 295 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 31 288 IPR003311 GO:0005634|GO:0006355
Lele43g0491 295 MobiDBLite consensus disorder prediction 52 119 - -
Lele43g0491 295 FunFam Auxin-responsive protein 175 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0491 Lele-ChrLele43 4455610 4458424 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0491 183 292 B3 DNA Binding Superfamily AT4G23980 32.727 3.00e-13 68.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Lele43g0491 AUX_IAA 2.7e-70 CL0072