Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0485 ATGAAGACAAGTCATAGAGAAGCACTTGTTCTGCTCTTAGCATTTTTCTTCCTAACAAGAGGGAATGCACAAGATACACTTGTTCCAGCAATCATAACTTTTGGTGATTCTGCAGTTGATGTGGGAAATAATGACTATTTGCCCACTATTTTTAAGGCAGATTACCCTCCTTATGGAAGAGATTTTGTCAACCATCAACCCACTGGAAGGTTTTGCAACGGAAAATTAGCTACTGATATTACTGCTGAAACTCTGGGATTTAAGACGTATCCAGATGCATATCTTAGCCCACAGGCATCAGGGAAGAATCTTCTTATTGGAGCAAATTTTGCTTCAGCTGCCTCTGGTTATGATGAGAAAGCTGCTATTTTGAATCATGCAATCCCATTGTCTCAACAATTAGACTACTTCAAGGAATACCAAAGCAAGCTAAACAAGGTTGCTGGAAGTCAAAAAGCAGCATCGATTATCAAGGGTGCATTGTACTTATTGAGTGCTGGAAGCAGTGACTTTGTGCAAAATTACTATGTCAACCCTTGGATCAACAAAGCCTACACTCCAGATCAGTATGGCTCATACCTCTTGGGATCATTTACAAGCTTTATCAAGGACTTGTATGGATTGGGAGCTAGGAAAATTGGAGTGACCTCACTCCCTCCATTGGGTTGCCTACCTGCTGCAAGAACTCTGTTTGGATATCATGAGAATGGATGTGTCTCAAGGCTGAATACAGATGCACAAGCATTTAACAAAAAGATCAGCTCTGCTGCAGCAAATCTCCAAAAGCAGCTTCCTGGTCTCAAGATAGTTGTCTTTGATATTTTCAAGCCTCTCAATGACCTTGTTCAGTCACCTTCAAACTCCGGTTTTGTGGAGGCAAGGAGAGGTTGCTGTGGGACTGGAACTGTGGAGACAACATCATTATTGTGCAATCCAAAATCACCAGGAACTTGTTCTAATGCTACCCAGTATGTGTTTTGGGACAGTGTTCATCCTTCTCAAGCTGCTAACCAGGTTCTAGCCGACGCCCTGATTGTTCAAGGCATAGCCCTTATCTCATAA 1062 0.4209 MKTSHREALVLLLAFFFLTRGNAQDTLVPAIITFGDSAVDVGNNDYLPTIFKADYPPYGRDFVNHQPTGRFCNGKLATDITAETLGFKTYPDAYLSPQASGKNLLIGANFASAASGYDEKAAILNHAIPLSQQLDYFKEYQSKLNKVAGSQKAASIIKGALYLLSAGSSDFVQNYYVNPWINKAYTPDQYGSYLLGSFTSFIKDLYGLGARKIGVTSLPPLGCLPAARTLFGYHENGCVSRLNTDAQAFNKKISSAAANLQKQLPGLKIVVFDIFKPLNDLVQSPSNSGFVEARRGCCGTGTVETTSLLCNPKSPGTCSNATQYVFWDSVHPSQAANQVLADALIVQGIALIS 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0485 353 CDD SGNH_plant_lipase_like 29 345 IPR035669 -
Lele43g0485 353 FunFam GDSL esterase/lipase APG 20 349 - -
Lele43g0485 353 Gene3D SGNH hydrolase 18 348 IPR036514 -
Lele43g0485 353 PANTHER GDSL ESTERASE/LIPASE EXL3 16 344 - -
Lele43g0485 353 Pfam GDSL-like Lipase/Acylhydrolase 31 343 IPR001087 GO:0016788
Lele43g0485 353 SUPERFAMILY SGNH hydrolase 124 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0485 Lele-ChrLele43 4421420 4423125 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0485 9 345 Pollen Coat Proteome AT1G75910 34.412 8.41e-59 191