Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0484 ATGATGAGGAAGAGCACGCCACCTTGGATTCTCGCTTTGTTCTTGTTTGTTTCATTCATCATTGTTGCAGATGGTGGTAGTTCAGGCAAGCACTTCGATCGCCAGCTTTTCAATTTTCTTCTCATATTTTTGGATAAAATGATGACATTTTCATTTATATTCTGGGGTTATGTTCGTTCTTTATAGGCTGAATATCAAACCAAAGTCCGTATTGACGTTGGCAGTGGCATTGTCCCTGCTCTTACCAGGAACCTAAGCTCAAGCAAATTAACAGGACAGATAACTACTTCATTTGCCAATCTGAAAACCTTGGAGTCCCTAGATTTGTCAAATAATGAATTGATTGGACAAGTACCAGCATTTCTTGCTGATCTTCCTAATTTGAAAGTCATTAATTTGACTGGAAACAAGCTCACAGGTTCAATTCCAAGGGCTTTAAGGGAAAAGGCTGATTTGCAGCTAAGTGTAGCCAGAAATCCAGGCCTCTGTCAGAAAGATTCATGCAAAGAACACAAGTTTGTAATTCCTCTTGTGGCATCAATTGCAGTTTTGGTCCTAATTATCATTCTTTCTGTGATGATTTGGAGACTCAGAAAGAAAAGACGAGTTTTGTCTACCAAATCTCGAAAGATGGGAATTCTAAAACATAAGAATCGAGAATTTTCTTACTCACAAGTTCTCCGTATCACCGACAATTTCAAAACTATTATCGGAGAAGGAGGATTTGGGAAAGTTTATCTTGGTACTTTAGAAGATGATGTTACTCAAGTTGCAGTAAAATTACTTTCTCCATCATCAAAGCAAGGGTACAAGGAATTTGAATCAGAGGCTCAACTCTTATCCGTTATTCATCACAGAAACTTGGTTTCACTCGTTGGATATTGTCATGAAAATGACATAAAAGCATTGATTTATGAATACATCGATAATGGGGACCTCGGCCAGCTATTATCAGAGAAAAACCCAAATGTTTTGAAGTGGAATGAGAGACTTCGAGTTGCAACTGATGCAGCAAAAGGATTGGAATATCTTCATAATGGTTGTAAGACTCCTATAATTCATAGAGACTTGAAGCCATCCAACATTTTACTACAAAAATCTAAGCTAGCCAAGATTGCTGATTTTGGACTCTCTAGAGCATTCACAAATGAAATCGACTCGCATCTATCAACTCAACCTGCTGGTACACCTGGTTATATTGATCCTGAATTTCAGAGATCTGGAAACCTAAATAAGAAAAGTGATATTTATAGTTTTGGGATGATTCTCCTTCAACTGATAACTGGTCATCCTCCGATAAAGAAAGGACCTGAGAATATTAGTTTCATTCTTGACTGGGTTCAACCTAAAATTGAATGCGGGGATATTGAGGGCATTGTTGACCCAAAATTGGCTGGAGAATTTGGAGTTTCATCAACATGGAAAGCTGTTGAAGTAGCCATGACATGTATCTTACCAACTCCAACCCAAAGGCCAGAAATAAGTTACGTGTTGCAAGAACTGCAAGAATGTTTGGCTTTGGAGATGGATCATCCAAGAATCAATACCACAACAAGTGATTCCCTCCATCATACTGTAAACTGTGAATCAATCACTATTCTCTCTGCTAGGTAG 1614 0.3823 MMRKSTPPWILALFLFVSFIIVADGGSSGKHFDRQLFNFLLIFLDKMMTFSFIFWGYVRSLXAEYQTKVRIDVGSGIVPALTRNLSSSKLTGQITTSFANLKTLESLDLSNNELIGQVPAFLADLPNLKVINLTGNKLTGSIPRALREKADLQLSVARNPGLCQKDSCKEHKFVIPLVASIAVLVLIIILSVMIWRLRKKRRVLSTKSRKMGILKHKNREFSYSQVLRITDNFKTIIGEGGFGKVYLGTLEDDVTQVAVKLLSPSSKQGYKEFESEAQLLSVIHHRNLVSLVGYCHENDIKALIYEYIDNGDLGQLLSEKNPNVLKWNERLRVATDAAKGLEYLHNGCKTPIIHRDLKPSNILLQKSKLAKIADFGLSRAFTNEIDSHLSTQPAGTPGYIDPEFQRSGNLNKKSDIYSFGMILLQLITGHPPIKKGPENISFILDWVQPKIECGDIEGIVDPKLAGEFGVSSTWKAVEVAMTCILPTPTQRPEISYVLQELQECLALEMDHPRINTTTSDSLHHTVNCESITILSAR 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0484 537 PRINTS Leucine-rich repeat signature 125 138 - -
Lele43g0484 537 PRINTS Leucine-rich repeat signature 104 117 - -
Lele43g0484 537 Pfam Protein kinase domain 234 499 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele43g0484 537 Gene3D Phosphorylase Kinase; domain 1 218 307 - -
Lele43g0484 537 CDD STKc_IRAK 237 503 - -
Lele43g0484 537 PANTHER OS07G0107800 PROTEIN-RELATED 84 505 - -
Lele43g0484 537 ProSitePatterns Serine/Threonine protein kinases active-site signature. 352 364 IPR008271 GO:0004672|GO:0006468
Lele43g0484 537 Gene3D Transferase(Phosphotransferase) domain 1 308 524 - -
Lele43g0484 537 FunFam Leucine-rich repeat receptor-like protein kinase 208 307 - -
Lele43g0484 537 SMART serkin_6 231 505 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele43g0484 537 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 308 513 - -
Lele43g0484 537 Gene3D Ribonuclease Inhibitor 76 173 IPR032675 -
Lele43g0484 537 Pfam Leucine rich repeat 84 138 IPR001611 GO:0005515
Lele43g0484 537 ProSiteProfiles Protein kinase domain profile. 231 514 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele43g0484 537 ProSitePatterns Protein kinases ATP-binding region signature. 237 260 IPR017441 GO:0005524
Lele43g0484 537 FunFam Leucine-rich repeat receptor-like kinase 70 165 - -
Lele43g0484 537 SUPERFAMILY Protein kinase-like (PK-like) 213 501 IPR011009 -
Lele43g0484 537 SUPERFAMILY L domain-like 84 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0484 Lele-ChrLele43 4412332 4418860 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0484 81 506 Receptor kinase-like Gene Family AT2G19230 49.655 1.51e-134 410
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Lele43g0484 Pkinase 1.5e-46 CL0016