Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0483 ATGCTAACAATGCAAGGATCATCTCAGTTGGTTATCACTGTTTCTACGAATGAAGAATCGTTGCGACCAAAAAATCGAGCAGTTTCTTACTCCAGAATTCTCAGAATCACTAAGAATTTGCAAGACTTAATTGGAGAAGGAGGTTTTGGGAAGGTTTATTATGGCACTCTAAGGGATAATACTCAAGTTGCTGTGAAGCTACTTTCTCAATCATCAATGCAAGGTTTCAAAGAATTTCGATCAGAGGTAGAACTCTTGATGGTTATTCATCACAGACATTTGGTTTCTCTCATTGGCTACTGTGAAGAAGGAAGTGTGAGGGCTTTAATTTATGAATATATGGCTAATGGCAATCTCCAACAGCATTTATCAGTGGAGAACCCTAATGTTTTGAAATGGAATGAGAGGCTTCAAATTGCATTGGATGCCGCACAAGGATTGGACTATTTGCATAATGGTTGTAAACCACCAATTGTCCATAGAGATTTAAAAACTTCCAGCATCTTACTAAATGAAAAGATGCAAGCCAAGATTTCTGACTTTGGACTATCACGAGCTTATGCAAATGATATTGACACTCATGTATCAACTCGTCCTGCTGGCACATTAGGTTATCTTGACCCTGACACCAATTCAGCTTGGAAATTGTTAGAGATAGCTATGTCTTGCACTCCACCATCTGCAGTTCAAAGGCCTGACGTCAGCCCTGTAGTATCCGAACTAAAGGAATGTCTGGCTCTAACACAAAGCATGGGGACGATTTCAACCAGTTCCTTGGATAGGCGTTCTTTCAGTTCTGATTCAGGCCTTATTCCATATGCTCGGTAG 828 0.4022 MLTMQGSSQLVITVSTNEESLRPKNRAVSYSRILRITKNLQDLIGEGGFGKVYYGTLRDNTQVAVKLLSQSSMQGFKEFRSEVELLMVIHHRHLVSLIGYCEEGSVRALIYEYMANGNLQQHLSVENPNVLKWNERLQIALDAAQGLDYLHNGCKPPIVHRDLKTSSILLNEKMQAKISDFGLSRAYANDIDTHVSTRPAGTLGYLDPDTNSAWKLLEIAMSCTPPSAVQRPDVSPVVSELKECLALTQSMGTISTSSLDRRSFSSDSGLIPYAR 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0483 275 ProSitePatterns Protein kinases ATP-binding region signature. 44 66 IPR017441 GO:0005524
Lele43g0483 275 FunFam Os07g0541700 protein 114 202 - -
Lele43g0483 275 PANTHER OS07G0107800 PROTEIN-RELATED 18 249 - -
Lele43g0483 275 ProSiteProfiles Protein kinase domain profile. 38 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele43g0483 275 SUPERFAMILY Protein kinase-like (PK-like) 24 214 IPR011009 -
Lele43g0483 275 Pfam Protein tyrosine and serine/threonine kinase 40 197 IPR001245 GO:0004672|GO:0006468
Lele43g0483 275 Gene3D Transferase(Phosphotransferase) domain 1 115 210 - -
Lele43g0483 275 Gene3D Phosphorylase Kinase; domain 1 44 114 - -
Lele43g0483 275 FunFam Leucine-rich repeat receptor-like protein kinase 15 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0483 Lele-ChrLele43 4376417 4379105 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0483 26 218 Receptor kinase-like Gene Family AT2G19230 61.140 5.55e-80 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Lele43g0483 PK_Tyr_Ser-Thr 2.1e-37 CL0016