Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0482 ATGGAGACAACACAATGGATTTTATGGTTTGCCTTTATCCAACTTTTCCTCAATCTTAGCGATGCAATGCTCAATAATGGAAGGAAACTCACCACCTCGGGTAAGCGCCTTAAGTTTATAATCACCTCATTAAACTTGAGCATGAGCAAGTTAAAAGGAGACATAGCTATCTCATTCTCACGTCTTACGGAGTTAGAGTCCCTGGATTTGCCAGATAATAACTTATCAGGAACAATACCAGAATTTCTAGCTGAATTGCCAAAGTTGAGAGTCCTTTTGGATGGTAACCCTGATCTTTGCTTGACGGATCCGTGCAAAAAGCATAAGTTCGTTATCCCACTAATAGCATCTGTTTCTGCTTTGGTTGTTGTAATCTTCTTGGTTTCACTTGGAATATGGATCCTTAGAATTAAAATACGGAAAGGGGATTTTACTTGGAATGAATCATCAAAACTAAGAAATCGAGCATTTTCTTACTCCAAAGTTATTGAGATAACTAATAACTTACAAAACTTGATTGGAGAAGGAGGATTTGGAAGGGTTTATTTAGGTAATCTTAAGAATGATATTCAAGTTGCAGTGAAGTTACTTTCTCAATCATCAGTACAAGGTCATAGAGAATTTCGATCAGAGGTAGAACTTTTAATGGTTGTTCATCATAGACATGTGGTTTCTCTGATTGGATATTGCGAAGAAAGTGGTTCGAGGGCATTGATATATGAGTATATGGCCAATGGTGATCTCCGCAGACATTTGTCGGTGATATCTTTTTATTTGTTTCAAAGTTCTGGCAATCTTACAAAAGGAAGCGATATATATAGTTTTGGTATAATTCTGCTAGAGCTAATCACTGGACAACCAGCAGCGAAAAGGCAACAAAACTATACCTTCTGTCTCCTACTTCATTGGGTTGCCCCTAAAGTTCAAAACAAAGAAATCCAGTCCATTGTTGATCCGAGGTTAGGAGGAAAATATAGTGTTGATTCGGCTTGGAAATTTCTAGAGGTAGCCATGGCATGCACTGCACCATCTGCAAATCAAAGGCCTGATATAAGTAAAGTTGTTTATGAACTACGGGAATGTTTGGCAATGGAGACAAGCTTGGAAGTGACCACCACCAGCAGCGACCACCCCAATTCAAGCAGTTTCACAAATATGAGTTTTGCGCAGTTTAATTCAGACTTCAGTTCTCTGTCTGCAAGATAG 1206 0.3864 METTQWILWFAFIQLFLNLSDAMLNNGRKLTTSGKRLKFIITSLNLSMSKLKGDIAISFSRLTELESLDLPDNNLSGTIPEFLAELPKLRVLLDGNPDLCLTDPCKKHKFVIPLIASVSALVVVIFLVSLGIWILRIKIRKGDFTWNESSKLRNRAFSYSKVIEITNNLQNLIGEGGFGRVYLGNLKNDIQVAVKLLSQSSVQGHREFRSEVELLMVVHHRHVVSLIGYCEESGSRALIYEYMANGDLRRHLSVISFYLFQSSGNLTKGSDIYSFGIILLELITGQPAAKRQQNYTFCLLLHWVAPKVQNKEIQSIVDPRLGGKYSVDSAWKFLEVAMACTAPSANQRPDISKVVYELRECLAMETSLEVTTTSSDHPNSSSFTNMSFAQFNSDFSSLSAR 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0482 401 Pfam Protein tyrosine and serine/threonine kinase 169 253 IPR001245 GO:0004672|GO:0006468
Lele43g0482 401 Gene3D Ribonuclease Inhibitor 12 110 IPR032675 -
Lele43g0482 401 SUPERFAMILY L domain-like 23 106 - -
Lele43g0482 401 PANTHER OS07G0107800 PROTEIN-RELATED 261 366 - -
Lele43g0482 401 Gene3D Phosphorylase Kinase; domain 1 143 242 - -
Lele43g0482 401 SUPERFAMILY Protein kinase-like (PK-like) 154 382 IPR011009 -
Lele43g0482 401 Gene3D Transferase(Phosphotransferase) domain 1 257 390 - -
Lele43g0482 401 FunFam Leucine-rich repeat receptor-like protein kinase 145 242 - -
Lele43g0482 401 ProSiteProfiles Protein kinase domain profile. 167 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele43g0482 401 ProSitePatterns Protein kinases ATP-binding region signature. 173 195 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0482 Lele-ChrLele43 4362546 4367594 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0482 40 253 Receptor kinase-like Gene Family AT3G21340 41.288 3.84e-52 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Lele43g0482 PK_Tyr_Ser-Thr 1.7e-17 CL0016