Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0481 ATGGTGGATTCATGCAAAAAGAAAAATCATAAGTTTGTCATTCCACTTGTTGCTTCTGTTTCTGCTTTAGCTGCAAGCCTCTTGGTTTGTCTTGTAATATGGATCTTCAAAACCAAGAAATTAAAAGGAGGATTTGGAAAGGTTTATTATGGCACTCTGGAGAATAATGTTGATGTTGCTGTGAAGCTACTTTCTCAAGCTTCAATACAAGGTTTCAAAGAATTTCGATCAGAGAGTTCTGGAAACCTGAATAAAAAGAGTGATGTTTATAGTTTCGGGATAATTCTACTTGAGCTAATCACGGGTCAGCCAGCAATAAGGAGAGAAAATGGCACCAATTGTCACATGCTTCATTGGGTTACACCAAAACTTGAAATGGGGGATATCAAATCCATCCTTGATCCAAGGTTAGAAGGAAATTGCAGCACCAATTCAGCTTGGAAATTGTTAGAGATAGCTATGTCTTGCACTCCACCATCTGCAGTTCAAAGGCCTGACGTAAGCCATGTAGTAGCCGAACTAAAGGAATGTCTGGCTCTGACCAAAAGCAAGAGGTGGAATTCAACCAGTTCTTTTGATATGGGTTCTTTGGAGGTTGATTCAGGGTTTATTCCACTTGCTCGGTAG 627 0.3987 MVDSCKKKNHKFVIPLVASVSALAASLLVCLVIWIFKTKKLKGGFGKVYYGTLENNVDVAVKLLSQASIQGFKEFRSESSGNLNKKSDVYSFGIILLELITGQPAIRRENGTNCHMLHWVTPKLEMGDIKSILDPRLEGNCSTNSAWKLLEIAMSCTPPSAVQRPDVSHVVAELKECLALTKSKRWNSTSSFDMGSLEVDSGFIPLAR 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0481 208 Gene3D Transferase(Phosphotransferase) domain 1 62 197 - -
Lele43g0481 208 Pfam Protein tyrosine and serine/threonine kinase 81 174 IPR001245 GO:0004672|GO:0006468
Lele43g0481 208 SUPERFAMILY Protein kinase-like (PK-like) 42 78 IPR011009 -
Lele43g0481 208 PANTHER OS07G0107800 PROTEIN-RELATED 7 78 - -
Lele43g0481 208 SUPERFAMILY Protein kinase-like (PK-like) 82 179 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0481 Lele-ChrLele43 4340910 4342794 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0481 42 78 Receptor kinase-like Gene Family AT5G59670 62.162 3.64e-08 51.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Lele43g0481 PK_Tyr_Ser-Thr 1.4e-05 CL0016