Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0479 ATGCAGTTTCTAGCCGCAATATGGTTTCAAAGTTCTGGCAATCTTACAAAAGGAAGCGATATATATAGTTTTGGTATAATTCTGCTAGAGCTAATCACCGGACAACCAGCAGCGAAAAGGCAACAAAATTATACCTTCAGTCTCCTACTTCAATGGGTTGCCCCTAAAGTTCAAAACAAAGAAATTCAGTCCATTGTTCATCCTAGGTTACGAGGACAATATAGTGTTGATTGGGCTTGGAAACTTCTAGAGGTAGCCATGGCATGCACTGCACCATCTGCAAAGCAAAGGCCTGATATAAGTAAAGTTGTTTATGAACTAAGGGAATGTTTGGCAATGGAGACAAGCGACAAGCTTGGAAGTGACCACCACCAGCGACCACCCCAATTCAAGCAGTTCCACCAATATTAG 411 0.4209 MQFLAAIWFQSSGNLTKGSDIYSFGIILLELITGQPAAKRQQNYTFSLLLQWVAPKVQNKEIQSIVHPRLRGQYSVDWAWKLLEVAMACTAPSAKQRPDISKVVYELRECLAMETSDKLGSDHHQRPPQFKQFHQY 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0479 136 Pfam Protein tyrosine and serine/threonine kinase 13 107 IPR001245 GO:0004672|GO:0006468
Lele43g0479 136 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 12 118 - -
Lele43g0479 136 SUPERFAMILY Protein kinase-like (PK-like) 13 111 IPR011009 -
Lele43g0479 136 Gene3D Transferase(Phosphotransferase) domain 1 3 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0479 Lele-ChrLele43 4312399 4313548 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0479 15 123 Receptor kinase-like Gene Family AT1G51880 39.450 8.25e-27 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Lele43g0479 PK_Tyr_Ser-Thr 3.9e-07 CL0016