Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0478 ATGGCTAATGGCAATCTCCAACAGCATTTATCAGTGGAGAACCCTAATGTTTTGAAATGGAATGAGAGGCTTCAAATTGCATTGGATGCCGCACAAGATTTAAAAACTTCCAAAATTTTACTAAATCAAAAGATGCAAGCCAAGATTTCTGACTTTGGACTATCTCGAGCTTTTGCAAATGATATTGACACTCATGTATCAACTCGTCCTGCTGGCACGTTAGCAATAAGGAGAGAAAATGGCGCCATTTGTCACATTCTTCATTGGGTTACTCCAAAACTTGAAATGGGGGATATCCAATCAATCATTGATCCAAAGTTAGAAGGAAGTTGCAGCACCAATTCAGCTTGGAAATTGTTAGAGATGGCTATGTCTTGCACTCCACCATCTGCATTTCAAAGGCCTGACATCAGCCATGTAGTATCCGAACTAAAGGAATGCCTGGCTCTAACACAAAGCATGGGGACGATTTCAACCAGTTCCTTGGATAGTCGTTCTTTCAGTTCTGATTCAGGCCTTATTCCATATGCTCGGTAG 537 0.4115 MANGNLQQHLSVENPNVLKWNERLQIALDAAQDLKTSKILLNQKMQAKISDFGLSRAFANDIDTHVSTRPAGTLAIRRENGAICHILHWVTPKLEMGDIQSIIDPKLEGSCSTNSAWKLLEMAMSCTPPSAFQRPDISHVVSELKECLALTQSMGTISTSSLDSRSFSSDSGLIPYAR 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0478 178 PANTHER OS07G0107800 PROTEIN-RELATED 1 152 - -
Lele43g0478 178 SUPERFAMILY Protein kinase-like (PK-like) 1 151 IPR011009 -
Lele43g0478 178 Gene3D Transferase(Phosphotransferase) domain 1 1 77 - -
Lele43g0478 178 Gene3D Transferase(Phosphotransferase) domain 1 78 163 - -
Lele43g0478 178 MobiDBLite consensus disorder prediction 159 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0478 Lele-ChrLele43 4265299 4266258 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0478 1 178 Receptor kinase-like Gene Family AT1G51880 38.793 1.94e-38 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Lele43g0478 None None None