Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0474 ATGGTTTCTTTTGTGGGGAACTGCAATGAAGGTGATGTGAAAGCATTGATCTATGACTATATGGCTCAGGGGAGTCTGCAAGGGCTATTGTCAGATAGAAATCCAAATGTTTTGAAGTGGTCTGAAAGACTTCAAATTGCTGTGAATGTTGCACTTGGCTTGGGCTATTTGCATAATGGTATTAGGCCACCTGTAGTTCATAGAGACTTGAAGACTACCGATATTTTGTTGAATAAAAAGATGGAAGCCAAGATTTCTGACTATAGACTATGTAGATCCTTCGCAAATGAAAATGACACTCACATATCAACTACACTGGCTGGCACATTCGGTTATCTTGATCCTGAGTAA 351 0.396 MVSFVGNCNEGDVKALIYDYMAQGSLQGLLSDRNPNVLKWSERLQIAVNVALGLGYLHNGIRPPVVHRDLKTTDILLNKKMEAKISDYRLCRSFANENDTHISTTLAGTFGYLDPE 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0474 116 FunFam Os07g0541700 protein 21 109 - -
Lele43g0474 116 SUPERFAMILY Protein kinase-like (PK-like) 2 116 IPR011009 -
Lele43g0474 116 Pfam Protein tyrosine and serine/threonine kinase 2 113 IPR001245 GO:0004672|GO:0006468
Lele43g0474 116 ProSiteProfiles Protein kinase domain profile. 1 116 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele43g0474 116 Gene3D Transferase(Phosphotransferase) domain 1 1 116 - -
Lele43g0474 116 PANTHER OS07G0107800 PROTEIN-RELATED 1 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0474 Lele-ChrLele43 4196715 4197390 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0474 1 116 Receptor kinase-like Gene Family AT2G19230 54.310 2.05e-42 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Lele43g0474 PK_Tyr_Ser-Thr 1.1e-18 CL0016