Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0473 ATGGAACGAGAGGCTTCAAATTGCATTGGATGCCGCACAAGGTTTCAGAGTTCTGGGAACCTGAATAAAAAGAGTGATGTCTATAGTTTTGGGATAATTCTACTTGAGCTAATCACGGGTCAACCAGCAATAAGGAGAGAAAATGGCGCCATTTGTCACATTCTTCATTGGGTTACTCCAAAACTTGAAATGGGGGATATCCAATCAATCATTGATCCAAGGTTAGAAGGAAGTTGCAGCACCAATTCAGCTTGGAAGTTGTTAGAGATAGCTATGTCTTGCACTCCACCATCTGCAGTTCAAAGGCCTGACATCAACCATGTAGTATCCGAACTAAAGGAATGTCTGGCTCTAACACAATCCATGGGGACTATTTCAACCAGTTCCTTGGATAGGCGTTCTTTCAGTTCTGATTCAGGCCTTATTCCATATGCTCGGTAG 441 0.4286 MEREASNCIGCRTRFQSSGNLNKKSDVYSFGIILLELITGQPAIRRENGAICHILHWVTPKLEMGDIQSIIDPRLEGSCSTNSAWKLLEIAMSCTPPSAVQRPDINHVVSELKECLALTQSMGTISTSSLDRRSFSSDSGLIPYAR 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0473 146 Gene3D Transferase(Phosphotransferase) domain 1 11 133 - -
Lele43g0473 146 PANTHER OS07G0107800 PROTEIN-RELATED 16 120 - -
Lele43g0473 146 SUPERFAMILY Protein kinase-like (PK-like) 20 119 IPR011009 -
Lele43g0473 146 Pfam Protein tyrosine and serine/threonine kinase 19 112 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0473 Lele-ChrLele43 4175803 4176625 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0473 15 117 Receptor kinase-like Gene Family AT4G29180 51.923 9.57e-34 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Lele43g0473 PK_Tyr_Ser-Thr 4.6e-06 CL0016