Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0471 ATGAGCAAGTTAAAAGGAGACATAGCTATCTCATTCTCACGGCTTACGGAGTTAGAGTCCCTGGATTTGTCAGATAATAACTTATCAGGAACAATACCAGAATTTCTAGCTGAATTGCCAAAGTTGAGAGTCCTTAATTTGAGAGGCAACAAGCTTACTGGTTCAATTCCCCAGGCTCTAAAGGAGAAGTCAGATTTGGAAATGAGTTTGGATGGTAACCCTGATCTTTGCTTGACGGATCCGTGCAAAAAGCGTAAGTTCGTTATCCCACTAATAGCATCTGTTTCTGCTTTGGTTGTTGTAATCTTCTTGGTTTCACTTGGAATATGGATCTTTAGAATTAAAATACGGAAAGGTTTGCACAAGATTCCCATGAAACCTTCCGCATTATTATGTCCTAGTAACTTGAAATTCTATGCCGAGGTCCACATTTTTAACACTAATGACATATCTTTTGCAATATTTACAGGGGATTTTACTTGGAATGAATCATCAAAACTAAGAAATCGAGCATTTTCTTATTCCAAAGTTATTGAGATAACTAATAACATACAAAACTTGATTGGAGAAGGAGGATTTGGAAGGGTTTATTTAGGCACTCTTAAGAATGATATTCAAGTTGCAGTGAAGTTACTTTCTCAATCATCGGTACAAGGTCATAGAGAATTTCGATCAGAGGTAGAACTTTTGATGGTTGTTCATCACAGACATTTGGTTTCTCTGATTGGATATTGCGAAGAAAGTGGTTCGAGGGCATTGATATATGAGTATATGGCCAATGGTGATCTCCGCCGACATTTGTCGGTGATATCTTTTTATTTGTTTCAAAGTTCTGGCAATCTTACAAAAGGAAGCGATATATATAGTTTTGGTATAATTCTGCTAGAGCTAATCACTGGACAACCAGCAGCGAAAAGGCAACAAAACTATACCTTCTGTCTCCTACTTCATTTGGTTGCCCCTAAAGTTAAAAACAAAGAAATCCAGTCCATTGTTGATCCGAGGTTAGGAGGAAAATATAGTGATGATTCGGCTTGGAAATTTCTAGAGGTAGCCATGGCATGCACTGCACCATCTGCAAATCAAAGGCCTGATATAAGTAAAGTTGTTTATGAACTACGGGAATGTTTGGCAATGGAGACAAGCTTGGAAGTGACCACCACCAGCAGCGACCACCCCAATTCAAGCAGTTTCACAAATATGAGTGTTGCGCAGTTTAATTCAGACTTCAGTTCTCTGTCTGCAAGATAG 1251 0.3861 MSKLKGDIAISFSRLTELESLDLSDNNLSGTIPEFLAELPKLRVLNLRGNKLTGSIPQALKEKSDLEMSLDGNPDLCLTDPCKKRKFVIPLIASVSALVVVIFLVSLGIWIFRIKIRKGLHKIPMKPSALLCPSNLKFYAEVHIFNTNDISFAIFTGDFTWNESSKLRNRAFSYSKVIEITNNIQNLIGEGGFGRVYLGTLKNDIQVAVKLLSQSSVQGHREFRSEVELLMVVHHRHLVSLIGYCEESGSRALIYEYMANGDLRRHLSVISFYLFQSSGNLTKGSDIYSFGIILLELITGQPAAKRQQNYTFCLLLHLVAPKVKNKEIQSIVDPRLGGKYSDDSAWKFLEVAMACTAPSANQRPDISKVVYELRECLAMETSLEVTTTSSDHPNSSSFTNMSVAQFNSDFSSLSAR 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0471 416 SUPERFAMILY Protein kinase-like (PK-like) 169 398 IPR011009 -
Lele43g0471 416 FunFam Leucine-rich repeat receptor-like kinase 1 79 - -
Lele43g0471 416 Gene3D Transferase(Phosphotransferase) domain 1 253 396 - -
Lele43g0471 416 ProSiteProfiles Leucine-rich repeat profile. 17 40 IPR001611 GO:0005515
Lele43g0471 416 FunFam Leucine-rich repeat receptor-like protein kinase 160 257 - -
Lele43g0471 416 Pfam Protein tyrosine and serine/threonine kinase 184 268 IPR001245 GO:0004672|GO:0006468
Lele43g0471 416 Gene3D Ribonuclease Inhibitor 1 86 IPR032675 -
Lele43g0471 416 Gene3D Phosphorylase Kinase; domain 1 159 252 - -
Lele43g0471 416 PRINTS Leucine-rich repeat signature 39 52 - -
Lele43g0471 416 PRINTS Leucine-rich repeat signature 18 31 - -
Lele43g0471 416 ProSitePatterns Protein kinases ATP-binding region signature. 188 210 IPR017441 GO:0005524
Lele43g0471 416 SUPERFAMILY L domain-like 4 80 - -
Lele43g0471 416 PANTHER OS07G0107800 PROTEIN-RELATED 276 381 - -
Lele43g0471 416 Pfam Leucine rich repeat 10 52 IPR001611 GO:0005515
Lele43g0471 416 ProSiteProfiles Protein kinase domain profile. 182 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0471 Lele-ChrLele43 4143456 4146119 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0471 2 268 Receptor kinase-like Gene Family AT3G21340 45.126 5.71e-62 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Lele43g0471 PK_Tyr_Ser-Thr 2.3e-17 CL0016