Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0470 ATGTCAAGTTTGGATGGTAACGCTGATCTTTGCTTGACGGATCCATGCAAAAAGCATAAGTTCGTTATCCCGCTAATATCATCTGTTTCTGCTTTGGTTGTTGTAATCTTCTTGGTTTCGCTTGGAATATGGATCTTTAGAATTAAAATTCTGAAAGGGGATTTCACTAGGAATGAATCATCAAAACTAAGAAATAGAGCATTTTCTTACTCCAAAGTTATTGAGATCACTAATAACTTACACAACTTGATTGGAGAAGGAGGATTTGGAAGGGTTTATTTAGGCACTCTTAAGAATGATATTCAAGTTGCAGTAAAGTTACTTTCTCAATCATCGGTACAAGGTCATAGAGAATTTCGATCAGAGGTAGAACTTTTGATGGTTGTTCATCATAGACATTTGGTTTCTCTGATTGGATATTGCGAAGAGAGTGGTGCGAGGGCATTGATATATGAGTATATGGCCAATGGTGATCTCCGCCGACATTTGTCGGGTGACACCGGGGAGGCTTTGAAATGGAAGATTGACTGCATCGAACTAAGGTTTCAAAGTTCTGGCAATCTTACAAAAGGAAGCGATATATATAGTTTTGGTATAATTCTGCTAGAGCTAATCACTGGACAACCAGCAGCGAAAAGGCAACAAAATTATACCTTCCGTCTCCTACTTCAATGGGTTGCCCCTAAAGTTCAAAACAAAGAAATCCAGTCCATTGTTGATCCGAGGTTAGGAGGAAAATATAGTGTTGATTCGGCTTGGAAATTTCTAGAGGTAGCCATGGCATGCACTGCACCATCTGCAAATCAAAGGCCTTGTATAAGTAAAGTTGTTTATGAACTACGGGAATGTTTGGCAATGGAGACAATCTTGGAAGTGACCACCACCAGCAGCGACCACCCCAATTCAAACAGTTCCACAAATATGAGTGTTGCGCAGTTTAATTCAGACTTCAGTTCTCCGTCTGCAAGATAG 972 0.3992 MSSLDGNADLCLTDPCKKHKFVIPLISSVSALVVVIFLVSLGIWIFRIKILKGDFTRNESSKLRNRAFSYSKVIEITNNLHNLIGEGGFGRVYLGTLKNDIQVAVKLLSQSSVQGHREFRSEVELLMVVHHRHLVSLIGYCEESGARALIYEYMANGDLRRHLSGDTGEALKWKIDCIELRFQSSGNLTKGSDIYSFGIILLELITGQPAAKRQQNYTFRLLLQWVAPKVQNKEIQSIVDPRLGGKYSVDSAWKFLEVAMACTAPSANQRPCISKVVYELRECLAMETILEVTTTSSDHPNSNSSTNMSVAQFNSDFSSPSAR 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0470 323 PANTHER OS07G0107800 PROTEIN-RELATED 182 290 - -
Lele43g0470 323 Pfam Protein tyrosine and serine/threonine kinase 80 172 IPR001245 GO:0004672|GO:0006468
Lele43g0470 323 Gene3D Phosphorylase Kinase; domain 1 53 152 - -
Lele43g0470 323 ProSitePatterns Protein kinases ATP-binding region signature. 84 106 IPR017441 GO:0005524
Lele43g0470 323 MobiDBLite consensus disorder prediction 294 323 - -
Lele43g0470 323 Gene3D Transferase(Phosphotransferase) domain 1 153 298 - -
Lele43g0470 323 SUPERFAMILY Protein kinase-like (PK-like) 65 310 IPR011009 -
Lele43g0470 323 FunFam Leucine-rich repeat receptor-like protein kinase 56 153 - -
Lele43g0470 323 ProSiteProfiles Protein kinase domain profile. 78 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0470 Lele-ChrLele43 4121441 4124792 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0470 5 287 Receptor kinase-like Gene Family AT4G20450 34.971 5.06e-56 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Lele43g0470 PK_Tyr_Ser-Thr 3.8e-18 CL0016