Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0469 ATGGAAAGTAAATCAAGTCTAAATGTTAAGATCACCACTTGTTATATCATGTTATGGCACATCTTATATCTTTGTTTTGAAATACCTTATTCATCAGGTTTGAAGATGATCTCTGATGGCAATCCAAGGATCATTTCACTGAACTTGAGTTCGAGGGGACTAACTGGCCCGATAGATGTTTCATTTTCAAGATTCACTAAACTACAATCCTTGGACTTATCATACAACAAACTGACCGGAGAAGTTCCAGAATTTCTTGCACAGCTATCAAATTTGAAGTTCCTTAATTTGACAGGGAATCAGCTCACAGGTTCAATTCCCAAATCACTATTGCTGAAGTCAAATACCACTTTGTCATGGAGATTGGAAAGAAATCCAGCATCTAAGACAGATGGGCTAGAGAAATCAAACAAATACTTATTTTCTTTAAGGGATGTTATTAGAATTACCAATAACTTCAAAACTAAAATTGGAAAAGGAGGATTTGGAGAAGTTTACCTTGGTACTCTGCAAGATGGTAGAGATGTTGCTGTCAAGCTTCTTTCTCAGACATCAAGGCAAGGAGATAGGGAGTTTCACTCAGAGGTAAATTTGTTGACTATAGTTCACCATAAAAACCTGGTTTCTTTTGTGGGGTACTGTGATGAAGGTGATGTAAAAGCATTGATCTATGAATATATGGCTCAGGGGAATCTGCAAGGGTTATTGTCAAAGAGAAATCCAAATGTTTTGAAGTGGTCTGAAAGACTTCAAATTGCTGTGAATGTTGCACTGGGATTGGACTATTTGCATAATGGTATTAGGCCACCTGTAGTTCATAGAGACTTGAAGACTTCAAATATTTTGTTGAATAAGAAGATGGAAGCCAAGGTTTCTGACTTTGGACTATGCAGATCTTTCACAAATGAAAATGACACTCATATATCAACCGCACTGGCTGGCACATTTGGTTATCTTGATCCTGAATTTCAAAGAACTGGACGGTTGAACAAAAAGAGTGATGTGTACAGTTTTGGGGTAATTCTGCTGGAGCTAATCACAGGACTACGTCCAATAAAAGAAGAGTCACCTGAAAATAATAGTCACTTACTTCATTGGGTTAATCGTAAACTTAAGAATGGAGATATTAAATCCATAGTTGATCCAAGGTTACAAGGACAGTATAATACAAGTTCAGCCTGGAAATTTGTAGAGACTGCAATGTCCTGCGTTCCACCAAAAGCAATCCAAAGACCTGATATCAGTGAAGTGTTAACTGAGCTAAAGATCTGTTTGAGTTTGAATCAACAACAGGGTCATACCCGTGAAAAATCAGAGAGTAGCAGCAGAAGGGCCAGCAATTCATTGGATATGGGCTCTCAGAACTTGATTGGGCTTGAATCAATAACAGGCCCATATGCTAGATAG 1407 0.3788 MESKSSLNVKITTCYIMLWHILYLCFEIPYSSGLKMISDGNPRIISLNLSSRGLTGPIDVSFSRFTKLQSLDLSYNKLTGEVPEFLAQLSNLKFLNLTGNQLTGSIPKSLLLKSNTTLSWRLERNPASKTDGLEKSNKYLFSLRDVIRITNNFKTKIGKGGFGEVYLGTLQDGRDVAVKLLSQTSRQGDREFHSEVNLLTIVHHKNLVSFVGYCDEGDVKALIYEYMAQGNLQGLLSKRNPNVLKWSERLQIAVNVALGLDYLHNGIRPPVVHRDLKTSNILLNKKMEAKVSDFGLCRSFTNENDTHISTALAGTFGYLDPEFQRTGRLNKKSDVYSFGVILLELITGLRPIKEESPENNSHLLHWVNRKLKNGDIKSIVDPRLQGQYNTSSAWKFVETAMSCVPPKAIQRPDISEVLTELKICLSLNQQQGHTREKSESSSRRASNSLDMGSQNLIGLESITGPYAR 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0469 468 Pfam Protein tyrosine and serine/threonine kinase 153 420 IPR001245 GO:0004672|GO:0006468
Lele43g0469 468 SUPERFAMILY L domain-like 40 112 - -
Lele43g0469 468 FunFam Leucine-rich repeat receptor-like kinase 29 130 - -
Lele43g0469 468 SUPERFAMILY Protein kinase-like (PK-like) 135 421 IPR011009 -
Lele43g0469 468 PRINTS Leucine-rich repeat signature 68 81 - -
Lele43g0469 468 PRINTS Leucine-rich repeat signature 89 102 - -
Lele43g0469 468 ProSitePatterns Protein kinases ATP-binding region signature. 157 179 IPR017441 GO:0005524
Lele43g0469 468 ProSitePatterns Serine/Threonine protein kinases active-site signature. 271 283 IPR008271 GO:0004672|GO:0006468
Lele43g0469 468 Gene3D Phosphorylase Kinase; domain 1 118 226 - -
Lele43g0469 468 SMART serkin_6 151 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele43g0469 468 FunFam Leucine-rich repeat receptor-like protein kinase 128 226 - -
Lele43g0469 468 Pfam Leucine rich repeat 46 102 IPR001611 GO:0005515
Lele43g0469 468 ProSiteProfiles Leucine-rich repeat profile. 91 113 IPR001611 GO:0005515
Lele43g0469 468 Gene3D Transferase(Phosphotransferase) domain 1 227 449 - -
Lele43g0469 468 ProSiteProfiles Protein kinase domain profile. 151 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele43g0469 468 Gene3D Ribonuclease Inhibitor 25 117 IPR032675 -
Lele43g0469 468 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 227 434 - -
Lele43g0469 468 PANTHER OS07G0107800 PROTEIN-RELATED 32 429 - -
Lele43g0469 468 CDD STKc_IRAK 157 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0469 Lele-ChrLele43 4111098 4117228 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0469 42 452 Receptor kinase-like Gene Family AT2G19230 44.902 1.36e-120 371
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Lele43g0469 PK_Tyr_Ser-Thr 3.3e-50 CL0016