Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0467 ATGAAGATGGCACCAATATGGATCATGGCTTTGGTTGTGTGTGTTTCTTCTACCATCGACCTTCGAAATTCAGCAAAAGTTGTTCCATCAGATGCTGGTGGTTCTGATACACACCGAGTGATAAGCATTGATTGTGGTGTAACTCAAGCCATTTGGGATGCAAATCGATTCTTTCATGAGGCAGATGACGCAGAGTTTGTAGAATCTGGCAAAGTTCATAATGGTCAAGTAAGAATCATGGAAATCACTTTCAGTGATGAGATCCGAGATATTGTAGTTCTTAACTACCAGGATGCTTATACCTTGGTTAAGAGAATTCCAAAGGGGGTTCTTGTTGATCGTTCAATTCCCAAGGCCCTGAGGGAGAACTTGGATGGAAATCCCGGTCTCTGTCAGAAGGGCTCTTGCAAAAACACTACAAAAATGTTCATAAAACCACTTGTTGCATCTGTAGCTTCTGTGGCGGTTCTTGCAATAATAGCCTACATTTCTTTGATTCTCTACAAAAATAAACATGTTACTGATACAAAAGCATTGTTTTCCAAGAAATATATTGATCAGCTTAAATCAAAAAGTCAAGGGTTTTCTCAAGCTGAAGTTCTTGGTATTACCAATGACTTTGAAACTGAAATTGGAGGAGGGGGATTTGGAAAAGTGTACCTTGGAAGACTAAACGATGGTACTCAAGTTGCAGTCAAGTTACTTTCTCAGTCATCACAGCAAGGCTTTAATGAGTTTCTATCAGAGGCAAAACTATTATCCATTATGTATCATAGAAATCTTCTTTCTCTTGTTGGCTATTGTGATGATGGGGACATGAAAGCTCTGATTTATGAATACATGGCAAAGGGAAATCTCCAGCACCTACTGTCAGATAGGAACCCAAATATTTTGAACTGGAATGAGAGACTTCAAATTGCCTTGGATACAGCATGTGGATTGGACTATCTACATAATGGTTGTAAGCCACCAATAATTCACAGAGACCTAAAATCTTCAAACATCTTGCTAAGTGAAAACATGCAAGCCAAGATTGCTGATTTCGGACTGTCTAAAGCGTTTTCCAATGAAACTGACACTCATATTACAACTCGCCCGGCAGGCACATTTGGTTACATAGACCCTGAATTCCATAGATCTGGAAACTTGAGAAAGAAAAGCGATGTTTATAGTTTTGGGGTAATTCTGCTCGAGCTACTGACTGGCCAACAAGCAATAACCAGAACGTCTGAAGGCACACGTCACATATCTGATTGGGTCAAACCAAAGCTTGAGAATGGGGATATCCAAGCCATTGTGGATCCACGATTAGAAGGAAAATTCAGTAGTTCTTCAGCATGGAAGTTTCTAGAGATAGCCATGTCATGCATTGCTCCAACAGCAATCCAAAGACCTGATATAAGTTCAGTTGTAATTGATCTAAAGCAGTGTTTGGCTATGGAAACTTCACTTGAAAGTGCAGAAAGCAGCAGTTTAATCTCAAGCACCTCACTATTGGAAACAAGTTATTCCCATTCTGCAGTATCATACTCACCTCCATCTGCTAGTGAAGAAGGTAGCATAATGGAGGAGGAAAGGCTATATGTAGTTTCTCTATGCAGCCAAAAGAATCCAAGGCGGCTCAGCTCTCAACCTGGTTTGCTGCTAATTAAGAGTACTGAAGATGAAGAACAAGAAGACACGGCAGTGGCTTCTGGTCTTGCATGTTTTTGCTTCCTTCTTCTTCTTCCTTCTTACCAGCTCTGCACAAGCTCTCGCAGATACTGCCGATTCTGGTAA 1779 0.4064 MKMAPIWIMALVVCVSSTIDLRNSAKVVPSDAGGSDTHRVISIDCGVTQAIWDANRFFHEADDAEFVESGKVHNGQVRIMEITFSDEIRDIVVLNYQDAYTLVKRIPKGVLVDRSIPKALRENLDGNPGLCQKGSCKNTTKMFIKPLVASVASVAVLAIIAYISLILYKNKHVTDTKALFSKKYIDQLKSKSQGFSQAEVLGITNDFETEIGGGGFGKVYLGRLNDGTQVAVKLLSQSSQQGFNEFLSEAKLLSIMYHRNLLSLVGYCDDGDMKALIYEYMAKGNLQHLLSDRNPNILNWNERLQIALDTACGLDYLHNGCKPPIIHRDLKSSNILLSENMQAKIADFGLSKAFSNETDTHITTRPAGTFGYIDPEFHRSGNLRKKSDVYSFGVILLELLTGQQAITRTSEGTRHISDWVKPKLENGDIQAIVDPRLEGKFSSSSAWKFLEIAMSCIAPTAIQRPDISSVVIDLKQCLAMETSLESAESSSLISSTSLLETSYSHSAVSYSPPSASEEGSIMEEERLYVVSLCSQKNPRRLSSQPGLLLIKSTEDEEQEDTAVASGLACFCFLLLLPSYQLCTSSRRYCRFW 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0467 592 ProSiteProfiles Protein kinase domain profile. 205 478 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele43g0467 592 PANTHER OS07G0107800 PROTEIN-RELATED 114 485 - -
Lele43g0467 592 ProSitePatterns Serine/Threonine protein kinases active-site signature. 325 337 IPR008271 GO:0004672|GO:0006468
Lele43g0467 592 FunFam receptor-like protein kinase FERONIA 169 280 - -
Lele43g0467 592 ProSitePatterns Protein kinases ATP-binding region signature. 211 233 IPR017441 GO:0005524
Lele43g0467 592 Pfam Protein tyrosine and serine/threonine kinase 207 472 IPR001245 GO:0004672|GO:0006468
Lele43g0467 592 SMART serkin_6 205 478 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele43g0467 592 CDD STKc_IRAK 211 476 - -
Lele43g0467 592 SUPERFAMILY Protein kinase-like (PK-like) 191 474 IPR011009 -
Lele43g0467 592 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 281 487 - -
Lele43g0467 592 Gene3D Phosphorylase Kinase; domain 1 211 281 - -
Lele43g0467 592 Gene3D Transferase(Phosphotransferase) domain 1 282 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0467 Lele-ChrLele43 4098896 4106982 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0467 84 507 Receptor kinase-like Gene Family AT1G51820 43.498 1.08e-114 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Lele43g0467 PK_Tyr_Ser-Thr 9.8e-49 CL0016